Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq144 136 6e-27 seq416 127 3e-24 >seq144 Length=1555788 Score = 136 bits (150), Expect = 6e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995 || || || |||||||| || || ||||| |||||||||||||| || |||||||| | Sbjct 1170365 GCCGTGTTGACGATGTCGAAGCCCACGTCGCCGCCGAAGGTGCTCGGCTTCCAGTAGAGC 1170306 Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055 || ||||| | | ||| |||||| || || | || ||||| ||||| | ||| | Sbjct 1170305 GGCGAGCACACGGGGTTGCTCATGAGACCCTTGAGCGAGAACGGCGCCCCAATCTCCACC 1170246 Query 9056 ATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGT 9115 |||||||| ||||| |||| || | |||| || ||| | | || ||| ||||| Sbjct 1170245 ATGCTCTCGCCGAACATGGAGCCCTGGCGCGACTTCTCGGCCAGGAGGCCCACGTAGAAC 1170186 Query 9116 TCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || || || || |||||||| || || | |||| |||||| || ||||||| || ||| Sbjct 1170185 TCCACGGCGTCCACGTCGCCGTACAGTTCCTCCATCTCGGCTGCCATCTCCTCGTCGCCT 1170126 >seq416 Length=412842 Score = 127 bits (140), Expect = 3e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 8966 CCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCCT 9025 || ||||| |||||||| ||||||||| | || ||||||||| |||| ||||||| || Sbjct 5484 CCCCCGAATGTGCTGGGCTTCCAGTACTCGGGCGAGCAGATGGGGTTCCCCATGAGGCCC 5543 Query 9026 TTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACGC 9085 || | || || || || |||| ||| | || |||| ||||||||||| ||||| ||| Sbjct 5544 TTGAGCGAGAAGGGGGCGCCCATCTCCACCATCGTCTCGCCGAAGATGGCGCCGGGCCGC 5603 Query 9086 GGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGCT 9145 || ||| | ||||| || | |||||| || | || || |||||||| || | | Sbjct 5604 GGCCGTTCCAAGATGAGCCCCGGGTAGAGCTCCAGGGCGTCCACGTCGCCGTACATCTCG 5663 Query 9146 TCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || ||| || || |||||| |||| ||| Sbjct 5664 CGCAGCTCCGCGGCCATCTCCGTCTCGCCT 5693 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612 || |||| ||| | |||||| |||| ||| ||||||||||| || || ||||| || Sbjct 7497 TCGGGCATCAGCGGGTGCCAGTGGTACAGGTGGTTGAACTCGGCAGCGATGCGGTTGCGG 7556 Query 9613 TACTGAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCG 9672 ||||| ||| | |||||| | ||| ||||| || | ||| |||||||||| ||| Sbjct 7557 TACTGGAAGTTCTCGCGGAACAGGAGCTCGGGGTCGAACTTGAGCCGGAAGTGGTAGCCG 7616 Query 9673 CTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGT 9713 || || ||||| || || | ||| | || |||||||| Sbjct 7617 CTCAGGTGCTGCACGTAGTCCTCGATCACGATCTTAATGGT 7657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722948861575000