Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq745 122 1e-22 seq234 95.1 2e-14 >seq745 Length=184117 Score = 122 bits (134), Expect = 1e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| ||||| ||||||||||| || ||||| || || || || || || | || | Sbjct 155091 TTCTTGTCGAGGCCGTACGCGATGGCGGCCGCTGTGGGCTCGTTGATGATCCTCAGCACG 155032 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || ||||| || || || |||| || || || || || || || || ||||| |||||| Sbjct 155031 TTGAGGCCGGCGATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAG 154972 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || |||||||| |||||||| | | || ||| || || || | || || || || Sbjct 154971 GCGGGGACCGTGACGACCGCATTGTTCACCGACTTGCCCAGGTAGGCCTCGGCAATCTCC 154912 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||||| ||||| || ||||| || || ||||| || Sbjct 154911 TTCATCTTGGTGAGCACCATGGAGGAGATCTCCTC 154877 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/197 (70%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 || ||||| || ||||| || || | || ||||| |||||||||||| |||||| Sbjct 152922 CTGCCGATGAGCCGCTTGGCGTCGTAGACGGTGTTGGAGGGGTTCATGGCCACCTGGTTC 152863 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| || || || | || | || | || || |||||||| |||||| Sbjct 152862 TTGGCGGCGTCGCCAATGAGCC--TC-TCCGAGTCGTTGAAGGCCACGTACGAGGGGGTC 152806 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || || || || |||||||| || || || || || | ||| || | ||| ||||| Sbjct 152805 GTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAACACGGCGACG 152746 Query 8114 CACGAATACGTTGTTCC 8130 ||||| || || || || Sbjct 152745 CACGAGTAGGTCGTGCC 152729 >seq234 Length=882459 Score = 95.1 bits (104), Expect = 2e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 ||||| || || || || || || || || || ||||| |||||||||||||| || ||| Sbjct 828404 TTCTTGTCCAGGCCATAGGCAATGGCTGCTGCTGTTGGCTCATTAATAATACGCAGTACA 828345 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||| || ||||| || | || ||||| || ||||| || || || ||||| || || Sbjct 828344 -TTCAGCCCTGCAATGGTGCCGGCGTCTTTGGTGGCTTGCCGCTGTGAGTCGTTGAAATA 828286 Query 7714 GGCCGGGACCGTTACGACCGC 7734 |||||| || || || || || Sbjct 828285 GGCCGGTACAGTCACCACAGC 828265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634449039845000