Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq20 105 5e-18 seq81637 95.1 1e-14 >seq20 Length=4946952 Score = 105 bits (116), Expect = 5e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| |||||||| || || ||||| |||| | || | | |||| |||| ||| Sbjct 2722210 TGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCTTCCAGCTGC 2722269 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || ||||| || || | ||||| || ||||| ||||||||||| ||||| || || || Sbjct 2722270 TTGCCTGCGAAGATTAGTCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGGATCTTG 2722329 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||| | ||||| || || |||| || ||||| || Sbjct 2722330 GCCTTCACGTTCTCGATGGTGTCACTTGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTC 2722389 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTA 101474 | || || || || ||||||||| ||| Sbjct 2722390 AGGGTCTTCACGAAGATCTGCATGATTA 2722417 >seq81637 Length=1039 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | || | ||| | || |||||||| || || || || ||||| || || Sbjct 830 CCTCCTCTCAGCCGAAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 889 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| ||||||||||| || || || |||| ||||| || || || || Sbjct 890 AGCGTGCGACCATCTTCCAATTGCTTGCCGGCGAAAATCAGCCGCTGCTGGTCTGGGGGG 949 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || ||||| || ||| || | || | |||||||| | ||||| Sbjct 950 ATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCAATCGTGTCAGATGCCTCCACC 1009 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 || || |||| || ||||| || | |||| Sbjct 1010 TCCAGCGTGATGGTCTTGCCCGTCAGAGTT 1039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395862446996625