Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq81637 179 5e-40 seq8098 167 3e-36 seq20 167 3e-36 seq1985 154 2e-32 seq745 109 7e-19 seq234 102 1e-16 >seq81637 Length=1039 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || ||||||||| | || Sbjct 600 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACCATCACGCTGGAGGTTGAGGCATCT 541 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | ||||| || || || || ||||| || || || || || ||| Sbjct 540 GACACCATCGAGAACGTGAAAGCAAAAATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 481 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || |||||||||||||| || || ||||| || |||||| Sbjct 480 CAGCGGCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCGCGGACTACAAC 421 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||||||||||||| || || || || |||| |||| || Sbjct 420 ATCCAAAAGGAGTCTACTCTGCATCTGGTCCTTCGGCTGAGGGGAGG 374 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || ||||| || || ||||| || ||||| ||| | || Sbjct 828 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTGGAGGCCTCT 769 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||||||| || || || || ||||| || || || Sbjct 768 GACACCATCGAGAATGTCAAGGCCAAGATTCAGGACAAAGAGGGGATTCCCCCAGACCAA 709 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| |||||||| ||||| || || || |||||| Sbjct 708 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTACGCTGGCAGACTACAAC 649 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | |||||||||||||| || ||||| || || ||||||| ||||| Sbjct 648 ATCCAAAAGGAGTCTACCCTCCACCTGGTCCTCCGGCTTCGAGGTGG 602 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || || || || || || || ||||| || ||||||||| | || Sbjct 372 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTGGAGGTTGAGGCATCT 313 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| ||||||||||| || ||||| || || || || || ||| Sbjct 312 GACACGATTGAGAATGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCCCCAGACCAG 253 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || || || || || ||||| |||||||| ||||||||| | || |||||| Sbjct 252 CAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTACCCTCTCAGACTACAAC 193 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||||||||| || || ||||| ||||||| ||||| Sbjct 192 ATCCAGAAGGAGTCTACTCTGCATCTCGTTCTCCGGCTTCGAGGTGG 146 Score = 141 bits (156), Expect = 1e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 171879 AACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACAT 171938 ||| || || || || || ||||| || ||||| ||| | || ||||| || || ||| | Sbjct 1039 AACTCTGACGGGCAAGACCATCACGCTGGAGGTGGAGGCATCTGACACGATTGAGAACGT 980 Query 171939 CAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGC 171998 |||||||||||||| || ||||| || || || || || ||||| || || ||||| || Sbjct 979 GAAAGCCAAGATTCAGGACAAGGAGGGGATCCCCCCAGACCAGCAGCGGCTGATTTTCGC 920 Query 171999 TGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTAC 172058 || || || | |||||||| || || || || || |||||| | || ||||||||||| Sbjct 919 CGGCAAGCAATTGGAAGATGGTCGCACGCTGGCAGACTACAACATCCAGAAGGAGTCTAC 860 Query 172059 TCTACACCTTGTTCTAAGGCT 172079 || ||||| ||||| |||| Sbjct 859 CCTCCACCTGGTTCTTCGGCT 839 >seq8098 Length=4112 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || || || || || || || ||||| || ||||| ||| | || Sbjct 188 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACCATCACTCTGGAGGTGGAGGCATCT 247 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| || ||||| || || ||||| || || || || || ||| Sbjct 248 GACACGATTGAGAATGTCAAGGCGAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 307 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || || || || ||||| |||||||| || || ||||| || |||||| Sbjct 308 CAGCGGTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACGCTCGCAGACTACAAC 367 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | |||||||||||||||||||| || ||||| |||| ||||||| Sbjct 368 ATCCAAAAGGAGTCTACTCTACATCTGGTTCTGCGGCTGAGGGGTGG 414 Score = 129 bits (142), Expect = 8e-25 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 171904 CTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAA 171963 || ||||||||| | || ||||| ||||| || |||| || |||||||| || || || Sbjct 2 CTGGAGGTTGAGGCATCTGACACCATCGAGAATGTCAAGGCAAAGATTCAGGACAAAGAG 61 Query 171964 GGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGT 172023 |||||||| || || ||||| | || || || || || || || || |||||||| || Sbjct 62 GGCATTCCCCCAGACCAGCAGAGGCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGC 121 Query 172024 ACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCT 172079 || ||||| || |||||| | || ||||||||||| || ||||| || || |||| Sbjct 122 ACGCTCGCAGACTACAACATCCAGAAGGAGTCTACCCTCCACCTGGTCCTTCGGCT 177 >seq20 Length=4946952 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||| ||||| ||| | Sbjct 2722412 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCAAGT 2722353 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || |||||||| || ||||||||||||||||| ||||| ||| Sbjct 2722352 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCCGACCAG 2722293 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||||| || || || || || ||||| |||||||| || || || | || |||||| Sbjct 2722292 CAGCGACTAATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACGCTGTCCGACTACAAC 2722233 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || || || || || || ||||| || || | || || ||||| Sbjct 2722232 ATCCAGAAAGAATCCACCCTCCACCTGGTCCTGCGTCTCCGTGGTGG 2722186 >seq1985 Length=32442 Score = 154 bits (170), Expect = 2e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || ||||| ||| | || Sbjct 32198 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACCATCACTCTGGAGGTGGAGGCCTCT 32257 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| || ||||| || || ||||| |||||||| || || || Sbjct 32258 GACACGATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 32317 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || || || |||||||| || || ||||| || |||||| Sbjct 32318 CAGCGCCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACGCTCGCAGACTACAAC 32377 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCT 172079 | || |||||||||||||| ||||| || || |||| Sbjct 32378 ATCCAGAAGGAGTCTACTCTGCACCTGGTCCTTCGGCT 32415 >seq745 Length=184117 Score = 109 bits (120), Expect = 7e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || || || || || || |||||| | | ||||||||||||| ||| || | | | || Sbjct 154874 CCGGAGGAGATCTCCTCCATGGTGCTCACCAAGATGAAGGAGATTGCCGAGGCCTACCTG 154933 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || || | ||||| |||| || || || || || || ||||||| || || || || Sbjct 154934 GGCAAGTCGGTGAACAATGCGGTCGTCACGGTCCCCGCCTACTTCAACGACTCCCAGCGC 154993 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | || || || || ||| || || || ||||| || Sbjct 154994 CAGGCCACCAAGGACGCGGGCACCATCGCCGGCCTCAACGTGCTGAGGATCATCAACGAG 155053 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 || |||||||| || || || || || || |||||||| Sbjct 155054 CCCACAGCGGCCGCCATCGCGTACGGCCTCGACAAGAA 155091 >seq234 Length=882459 Score = 102 bits (112), Expect = 1e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757 ||||| | | |||| || ||||||||||| || || |||| || ||||| || || || Sbjct 828253 ACTGTAACAAATGCTGTGGTGACTGTACCGGCCTATTTCAACGACTCACAGCGGCAAGCC 828312 Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAAC 195816 || || ||||| | | ||||| || || || ||| || | ||||| ||||| ||||| Sbjct 828313 ACCAAAGACGCCGGCACCATTGCAGGGCTGAA-TGTACTGCGTATTATTAATGAGCCAAC 828371 Query 195817 AGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||| || || ||||| ||||| ||||||||||| Sbjct 828372 AGCAGCAGCCATTGCCTATGGCCTGGACAAGAA 828404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657154170010000