Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq81637 116 9e-21 seq1985 102 2e-16 seq8098 100 7e-16 >seq81637 Length=1039 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || || |||||| |||| ||||| |||||||| |||| Sbjct 813 AAGACGCTGACTGGCAAGACCATCACTCTGGAGGTGGAGGCCTCTGACACCATCGAGAAT 754 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || ||||| || ||| || ||| || | || |||||| Sbjct 753 GTCAAGGCCAAGATTCAGGACAAAGAGGGGATTCCCCCAGACCAACAGCGCCTGATCTTC 694 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||||||||| | || |||| || |||||| |||| || |||||| Sbjct 693 GCCGGCAAGCAGCTGGAAGATGGTCGTACGCTGGCAGACTACAACATCCAAAAGGAGTCT 634 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || ||||| || | | |||||| Sbjct 633 ACCCTCCACCTGGTCCTCCGGCTTCGA 607 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| ||||| || || || || ||||| |||| || || |||||| Sbjct 369 CAGATCTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTGGAGGTTGAGGCATCTGAC 310 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || || || ||| || Sbjct 309 ACGATTGAGAATGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCCCCAGACCAGCAG 250 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| |||||||||| | || | | || |||||| || Sbjct 249 AGGTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTACCCTCTCAGACTACAACATC 190 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||||||||| || || ||| | | |||||| Sbjct 189 CAGAAGGAGTCTACTCTGCATCTCGTTCTCCGGCTTCGA 151 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 206187 AACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT 206246 ||| || || || || || ||||| |||| ||||| |||||||| | || || Sbjct 1039 AACTCTGACGGGCAAGACCATCACGCTGGAGGTGGAGGCATCTGACACGATTGAGAACGT 980 Query 206247 -AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 ||||| || |||||| || || || || || || ||| || | || || |||| Sbjct 979 GAAAGCCAA-GATTCAGGACAAGGAGGGGATCCCCCCAGACCAGCAGCGGCTGATTTTCG 921 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 |||| ||||| ||||||||||| | || |||| || |||||| ||||||| ||||||| Sbjct 920 CCGGCAAGCAATTGGAAGATGGTCGCACGCTGGCAGACTACAACATCCAGAAGGAGTCTA 861 Query 206366 CTCTTCACCTTGTT 206379 | || ||||| ||| Sbjct 860 CCCTCCACCTGGTT 847 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | | || ||||| || |||||||| || |||| || ||||| |||| || Sbjct 607 TCGAAGCCGGAGGACCAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCCAGCGT 666 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||||||||||||||| ||||||||||| || || ||||| Sbjct 667 ACGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTG 711 >seq1985 Length=32442 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| |||| ||||| |||||||| | || Sbjct 32213 AAGACTCTGACGGGCAAGACCATCACTCTGGAGGTGGAGGCCTCTGACACGATTGAGAAT 32272 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| || || || || || ||| || ||| || | || |||||| Sbjct 32273 GTCAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGCGCCTGATCTTC 32332 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| |||||||||| | || | || || |||||| ||||||| |||||| Sbjct 32333 GCCGGCAAGCAACTGGAAGATGGTCGCACGCTCGCAGACTACAACATCCAGAAGGAGTCT 32392 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 32393 ACTCTGCACCTGGT 32406 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || ||||| ||||||||||| ||||||| || ||||| || | || | ||||||||| Sbjct 32406 ACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGACCATCTTCC 32347 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || ||||| ||||||||||| || || ||||| Sbjct 32346 AGTTGCTTGCCGGCGAAGATCAGGCGCTGTTG 32315 >seq8098 Length=4112 Score = 100 bits (110), Expect = 7e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| ||||| || || || || |||||| |||| ||||| |||||| Sbjct 191 CAGATCTTTGTCAAGACGCTGACGGGCAAGACCATCACTCTGGAGGTGGAGGCATCTGAC 250 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || || || ||| || Sbjct 251 ACGATTGAGAATGTCAAGGCGAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAGCAG 310 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| |||||| |||||||||| | || | || || |||||| || Sbjct 311 CGGTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACGCTCGCAGACTACAACATC 370 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 || || ||||||||||| || || ||| || Sbjct 371 CAAAAGGAGTCTACTCTACATCTGGTTCTG 400 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 206227 TCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGAC 206286 |||||||| |||| || ||| ||||||||| || ||||| || ||| || ||| Sbjct 17 TCTGACACCATCGAGAATGTCAAGGCAAAGATTCAGGACAAAGAGGGCATTCCCCCAGAC 76 Query 206287 GCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTAC 206346 || || || ||||||||||| ||||| |||||||||| | || | || || ||| Sbjct 77 CAGCAGAGGCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACGCTCGCAGACTAC 136 Query 206347 AACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||| ||||||| |||||||| || ||||| || Sbjct 137 AACATCCAGAAGGAGTCTACCCTCCACCTGGT 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180516688446125