Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq53 156 5e-33 >seq53 Length=3035741 Score = 156 bits (172), Expect = 5e-33 Identities = 134/166 (81%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 2982882 CTTGAGACCAGTGATGTGTGCAATCATGTAGGTGAGCAGTGCGTAGCTGGCGATGTTGAA 2982941 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| ||||| || |||| ||| |||| | ||||||||||||||| || ||||| || || Sbjct 2982942 GGGCACCCCAAGTCCCAGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATC 2983001 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || ||||| || |||||||| |||||| || |||||||||||| Sbjct 2983002 CGCGACGTAGAATTGGCACAGTGCGTGGCATGGAGGCAGCGCCATG 2983047 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 ||| || ||||| | ||||||||||||||| || || |||||||| || || | | Sbjct 2983596 GGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTCTCCCTCCTCGCGCTC 2983655 Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 | ||||||| ||| | || || | | || |||| |||||||||||| || || Sbjct 2983656 GGGGAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGCGTCCCAGATCTTGACGCC 2983715 Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 |||||||||||||||||| | | ||||| ||| ||| || Sbjct 2983716 CTTGGCGGAGAGCTCCTTGGCATTGGTGGACCCCTGGAGGA 2983756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582859838700000