Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1427 95.1 2e-13 seq17 95.1 2e-13 >seq1427 Length=60525 Score = 95.1 bits (104), Expect = 2e-13 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACG 1818128 ||| | |||||||| ||| |||||| ||||| | | | |||| |||||| Sbjct 37736 ATGTTGAAGGGCGTGACGATCTCGGGGAAGGTCATGTTGGCGGCGATGGAGCGCGGCACG 37677 Query 1818129 CCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTG 1818188 || |||| ||| ||| | | ||||||||| ||||||| | |||||| | |||| | Sbjct 37676 CCGACCTGGTCGATGGAGAGGTTGGGGTCGGGCGTGATGACCGTGCGCGCCGAGAAGTCG 37617 Query 1818189 ACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCT 1818243 ||||||||||||||| ||||| || | | || ||||||||||||| ||||| Sbjct 37616 ACGCGCTTGCCCATGAGGTTGCCTCGCACGCGACCTTCCTTGCCCTTGAGCCGCT 37562 >seq17 Length=5228726 Score = 95.1 bits (104), Expect = 2e-13 Identities = 107/141 (76%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1600576 CTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGTGCGGGTTGATCACAATGTC 1600635 ||| |||| | |||| ||||||||||||||||||| |||||||||||| || ||||| Sbjct 3053687 CTCGATCAGCATGCCGATGGTCATGCGCGACGGGAATCCGTGCGGGTTGAACAGGATGTC 3053746 Query 1600636 GGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTCGGTGGAGCGCACGCTGCCCAC 1600695 |||||| ||||| | | || | ||||| ||||||||| | || | || || Sbjct 3053747 GGGCGTCATGCCGCC-CTCGCTGA--ACGGCATATCCTCGGTGCGCCACAGCCGGCTCAA 3053803 Query 1600696 GGTGCCCTTTTGGCCGTGGCG 1600716 | ||||||| ||||||||||| Sbjct 3053804 GATGCCCTTCTGGCCGTGGCG 3053824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7169504285452250