Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq291 96.9 4e-15 seq69 87.8 2e-12 seq15 82.4 8e-11 >seq291 Length=695248 Score = 96.9 bits (106), Expect = 4e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||| | ||| || || ||||||||||| ||||| || ||||| || Sbjct 450770 GTGAAGATGTAACGGGGGCTGGCGGCGTCCTTGCCACCGTGGAGACGAGTGCCGAACTGC 450829 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 || | |||| || ||||||| ||||||| |||||| |||||||| |||| ||||| Sbjct 450830 CCGATGGGCTGCAGCAGGTTCACGTTGTTGCTGCCCACGAAGTTTTGCGCCAGGTTGA 450887 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||||||||| |||| |||||| || ||||||||||| || || || || ||||| Sbjct 450770 GTGAAGATGTAACGGGGGCTGGCGGCGTCCTTGCCACCGTGGAGACGAGTGCCGAACTGC 450829 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCA 152140 || ||||| || ||||| | ||||||| ||||||||| || || |||| Sbjct 450830 CCGATGGGCTGCAGCAGGTTCACGTTGTTGCTGCCCACGAAGTTTTGCGCCA 450881 >seq69 Length=2608117 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | |||||| ||||| ||||| || ||||| |||||||| || Sbjct 671177 GTGAAGATGTATCGAGGGCTGGCGGCATCTTTGCCGCCATTTAGCCGGGTTCCAAATTGG 671236 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAA 152141 || ||||| |||| |||| ||||||| ||| || || ||||| ||||| Sbjct 671237 CCGATGGGCTGCAGGATATTGATGTTGTTGCTGCCAACAAAGTTCTGGGCCAA 671289 >seq15 Length=5323573 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 158943 AAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTG 159002 ||||||||| | ||||||| ||| || ||||| ||||||||||| || || | ||||| Sbjct 4496664 AAACTCGCGCACGCTGTGCACCTCGCCCGTCGCGATCACAAAGTCGTCCGGCTCCGGCTG 4496723 Query 159003 TTGGAGCATGAGCCACATGGCCT 159025 || ||||| ||||||||||||| Sbjct 4496724 CTGCAGCATCAGCCACATGGCCT 4496746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546626887775000