Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq53 156 4e-33 >seq53 Length=3035741 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||||| |||||||| ||||| || || |||||||| |||||||| | ||| Sbjct 2982898 TGTGCAATCATGTAGGTGAGCAGTGCGTAGCTGGCGATGTTGAAGGGCACCCCAAGTCCC 2982957 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 | ||| ||||||| || || |||||||| |||||||| |||| |||||||||||||||| Sbjct 2982958 AGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATCCGCGACGTAGAATTGG 2983017 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || || | |||||| || || |||||||| || || | ||| Sbjct 2983018 CACAGTGCGTGGCATGGAGGCAGCGCCATGAGTGGCACATC 2983058 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||| | || || |||||||| || || |||||| | || |||||||||||||||||| || Sbjct 2983058 GATGTGCCACTCATGGCGCTGCCTCCATGCCACGCACTGTGCCAATTCTACGTCGCGGAT 2982999 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || |||||||| |||||||| || || ||||||| ||| |||| | |||||||| ||| Sbjct 2982998 GGAGAGCTGTCATGCCAGCTGTACCAGCGATCGGCTGACCTGGGACTTGGGGTGCCCTTC 2982939 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| |||||||| || || Sbjct 2982938 AACATCGCCAGCTACGCACTGCTCACCTACATGATTGCACA 2982898 Score = 120 bits (132), Expect = 3e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || || ||||| | ||||||||| |||||||| || |||| ||| |||||||| Sbjct 2983591 TAGTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTCTCCCTCCTCG 2983650 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 || ||||| ||| || |||||| ||| | || || |||| |||||||||||||| Sbjct 2983651 CGCTCGGGGAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGCGTCCCAGATCTTG 2983710 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057 || ||| || ||||||||||||| || |||| |||| Sbjct 2983711 ACGCCCTTGGCGGAGAGCTCCTTGGCATTGGTGGACCCC 2983749 Score = 120 bits (132), Expect = 3e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347 |||| |||| || ||||||||||||| || ||| || |||||||||||||| |||| Sbjct 2983749 GGGGTCCACCAATGCCAAGGAGCTCTCCGCCAAGGGCGTCAAGATCTGGGACGCCAACGG 2983690 Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407 || || | ||| |||||| || ||| ||||| || |||||||| ||| |||| || Sbjct 2983689 CTCGCGGGCCTTCCTGGACCGGCAGGGCTTCCCCGAGCGCGAGGAGGGAGACCTGGGTCC 2983630 Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 |||||||| ||||||||| | ||||| || || || || Sbjct 2983629 TGTCTACGGCTTCCAGTGGCGCCACTTCGGCGCCGACTA 2983591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447779817510000