Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8098 141 7e-29 seq1985 141 7e-29 seq20 138 8e-28 seq81637 136 3e-27 >seq8098 Length=4112 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || ||||| || || || |||||||||||||||||| || ||| Sbjct 414 CCACCCCTCAGCCGCAGAACCAGATGTAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCG 355 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| ||||| |||||||| |||||||| |||| || Sbjct 354 AGCGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGGGGG 295 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| |||||| ||| | | | || ||||| | | |||||| Sbjct 294 ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCAATCGTGTCAGATGCCTCCACC 235 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || ||||| ||||| || ||||| || ||||| |||||| Sbjct 234 TCCAGAGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCATG 187 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | | |||||||| || || |||||| ||||||||||| || Sbjct 190 CATGCCTCCTCTCAGCCGAAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC 131 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||| ||||| ||||| ||||||| | |||||| |||| Sbjct 130 TGCGAGCGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGG 71 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||| | | ||| | |||||||| | | | Sbjct 70 GGGAATGCCCTCTTTGTCCTGAATCTT-TGCCTTGACATTCTCGATGGTGTCAGATGCCT 12 Query 44286 CCACCTCCA 44294 | ||||||| Sbjct 11 CAACCTCCA 3 >seq1985 Length=32442 Score = 141 bits (156), Expect = 7e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | | |||||||| || || |||||| ||||||||||| || Sbjct 32428 CATGCCTCCTCTCAGCCGAAGGACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTC 32369 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||| ||||| ||||| ||||||| ||||| || |||| Sbjct 32368 TGCGAGCGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCTGG 32309 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | | ||| | || ||||| | || | Sbjct 32308 GGGAATGCCCTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATCGTGTCAGAGGCCT 32250 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| ||||| || |||||||||||||| ||||| Sbjct 32249 CCACCTCCAGAGTGATGGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 32198 >seq20 Length=4946952 Score = 138 bits (152), Expect = 8e-28 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| || || ||||||||||| |||| || ||| | || ||| Sbjct 2722204 ACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCTTCC 2722263 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||||| || | ||| | |||||||| ||| Sbjct 2722264 AGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGG 2722323 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | |||| | |||||||| | |||||||||| || || ||||| Sbjct 2722324 ATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTTGGCTCCACCTCCAGGGTGATGGTCTT 2722382 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| ||||||||||||||||| |||||||| Sbjct 2722383 GCCCGTCAGGGTCTTCACGAAGATCTGCATGAT 2722415 >seq81637 Length=1039 Score = 136 bits (150), Expect = 3e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | ||||| || || || |||||||||||||||||| || Sbjct 370 CATGCCTCCCCTCAGCCGAAGGACCAGATGCAGAGTAGACTCCTTTTGGATGTTGTAGTC 429 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || || |||||||| || || || |||| |||||||| |||| Sbjct 430 CGCGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGCCGCTGCTGGTCTGG 489 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| || || ||||| | |||| | |||||||| | | | Sbjct 490 GGGGATCCCCTCCTTGTCCTGGAT-TTTTGCTTTCACGTTCTCGATGGTGTCAGATGCCT 548 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| ||| || ||||| ||||| || |||||||||||||| ||||| Sbjct 549 CAACCTCCAGCGTGATGGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 600 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||||||||||||||| || || || || | || ||| Sbjct 620 ACCAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCCAGCGTACGACCATCTTCC 679 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| ||||| || |||| || | || || || ||| Sbjct 680 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATCCCCTCTTTGTCCTGA 739 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || |||||||||| || || ||||| Sbjct 740 ATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCCTCCACCTCCAGAGTGATGGTCTTG 799 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || |||||||||||||| |||||| Sbjct 800 CCAGTCAGCGTCTTCACGAAGATCTGCATG 829 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || | ||| || | || ||||||||||| ||||| || Sbjct 181 CTCCTTCTGGATGTTGTAGTCTGAGAGGGTACGACCATCTTCCAGCTGCTTGCCGGCGAA 240 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| | |||||| |||| || | || ||||| ||| ||||| ||| | | Sbjct 241 GATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 300 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | | || ||||||| ||| || ||||| ||||| || ||||| || Sbjct 301 CTCAATCGTGTCAGATGCCTCAACCTCCAGCGTGATGGTCTTGCCCGTCAGCGTCTTGAC 360 Query 44326 GAAGATTTGCATG 44338 ||||| |||||| Sbjct 361 AAAGATCTGCATG 373 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | | |||||||| || || |||||| ||||||||||| || Sbjct 826 CATGCCTCCTCTCAGCCGAAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC 885 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| ||||| ||||| || |||| |||||||| |||| Sbjct 886 TGCCAGCGTGCGACCATCTTCCAATTGCTTGCCGGCGAAAATCAGCCGCTGCTGGTCTGG 945 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| |||| | |||| | || ||||| | | | Sbjct 946 GGGGATCCCCTCCTTGTCCTGAATCTT-GGCTTTCACGTTCTCAATCGTGTCAGATGCCT 1004 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319 ||||||||| ||| || ||||| ||||| || || Sbjct 1005 CCACCTCCAGCGTGATGGTCTTGCCCGTCAGAGT 1038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359612536639125