Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq4727 114 2e-20 >seq4727 Length=157580 Score = 114 bits (126), Expect = 2e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || ||||| || ||||| | |||||| | || || || Sbjct 144856 CCTGGTGGCCGAACTGGTTGCAGGGGAAGCCGAGCACCGCGAGCCCCTGGGCGCCGTAGC 144797 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 | | |||||||||||| | ||| ||| | |||| | || | |||||||||||||| | Sbjct 144796 GGCCCTGCAGCTCGTTTAGCTGGGTGAAGTCCCTGGTGGTCGTGCCTCAGAGGGACGCCA 144737 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCG 83538 ||||||||||||||| ||| ||| || Sbjct 144736 CGTTCTCGATGAGCACCACCTTGCCGCG 144709 Score = 114 bits (126), Expect = 2e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || ||||| || ||||| | |||||| | || || || Sbjct 152554 CCTGGTGGCCGAACTGGTTGCAGGGGAAGCCGAGCACCGCGAGCCCCTGGGCGCCGTAGC 152495 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 | | |||||||||||| | ||| ||| | |||| | || | |||||||||||||| | Sbjct 152494 GACCCTGCAGCTCGTTTAGCTGGGTGAAGTCCCTGGTGGTCGTGCCTCAGAGGGACGCCA 152435 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCG 83538 ||||||||||||||| ||| ||| || Sbjct 152434 CGTTCTCGATGAGCACCACCTTGCCGCG 152407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608606512950200