Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq713 87.8 4e-12 >seq713 Length=581599 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| || || || ||| | ||| | |||||||| |||||| | ||||| ||| || || Sbjct 120626 CTGCCCACCGTTTAAGATTGTGGTGCTGGACGAAGCGGACTCGATGACATCCGCGGCCCA 120685 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGT-GACGCGTTTTTGCCTGGTGT 254319 | |||| || ||||| |||||||| |||| || | |||||| || ||||| | | Sbjct 120686 GGCCGCGCTGCGCCGCACGATGGA-ACGCGAGACGAAGACGACGCGATTCTGCCTCATCT 120744 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||||||||||| ||||| | || || |||| || ||| ||||||| || |||| Sbjct 120745 GCAACTACGTGAGCCGCATCATTGAGCCACTCACTTCGCGCTGCTCCAAGTTCCGCTTCA 120804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073422390411840