Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq297 105 5e-18 >seq297 Length=420882 Score = 105 bits (116), Expect = 5e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||| || ||| || | ||||| ||||| ||||| |||| ||||||| Sbjct 395238 TGGCCTTTGCTGCTGTCGAGGGCATCTTCTTTTCGGGGTCGTTTGCCTCCATCTTCTGGC 395297 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| ||| |||||||| || | | || ||||| ||| | ||||||||||||| Sbjct 395298 TGAAGAAGCGTGGTCTCATGCCCGGCCTCACATTCTCCAATGAGCTCATTAGCCGTGACG 395357 Query 22868 A 22868 | Sbjct 395358 A 395358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356125038367015