Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq463 98.7 7e-16 >seq463 Length=246817 Score = 98.7 bits (108), Expect = 7e-16 Identities = 125/171 (73%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || ||||| || || ||||| | | ||||||||| ||||| || || || ||||| Sbjct 227307 CATATCGGTGTAGTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTC 227366 Query 25833 TCCATCTTCCCTGTGCTC---AAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGC 25889 ||| || || | |||| ||||||| | |||| ||| | | || || ||||| Sbjct 227367 TCCTTCCTCGC---GCTCGGGAAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGC 227423 Query 25890 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||| ||||| || ||||| |||||||||| |||| || ||||| || Sbjct 227424 GTCCCAAATCTTGACGCCCTTGGCGGAGAGCTCCTTGGCATTGGTGGAACC 227474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340033943597865