Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq10225 91.5 1e-13 >seq10225 Length=9847 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || || || || || || |||| Sbjct 8936 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCATCTTCCAGCTGCTTGCCGGCG 8995 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||||||||| || || || ||||| ||| || || | Sbjct 8996 AAGATCAGCCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 9055 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| | ||||||||| | || | || || || ||||| || || Sbjct 9056 TTCTCAATGGTGTCGGAGGCCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGCGTCTTG 9115 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 9116 ACAAAGATCTGCATGCCT 9133 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || || || || || || || | Sbjct 9164 GACTCCTTCTGGATGTTGTAGTCTGCGAGGGTCCGGCCATCTTCCAGCTGCTTGCCCGCG 9223 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||||||||| || || || ||||| ||| || || | Sbjct 9224 AAGATCAGCCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 9283 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| | ||||||||| | || | || || || ||||| || || Sbjct 9284 TTCTCAATGGTGTCGGAGGCCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGCGTCTTG 9343 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 9344 ACAAAGATCTGCATGCCT 9361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496107286983600