Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq297 114 2e-20 >seq297 Length=420882 Score = 114 bits (126), Expect = 2e-20 Identities = 153/208 (74%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 159742 CGCCA-GCAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATC 159799 ||||| ||| |||||| |||||||| |||||||| || | ||| | |||||||| || Sbjct 396676 CGCCAAGCAGCCTGTCGGCCACAAACTCGATGTA-CTGCTTCATGAGGTCACAGTTCATG 396618 Query 159800 CCCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCG 159859 || | || | ||||| ||||| |||| ||||||||||| |||||| || || || Sbjct 396617 CCGATAAGGTTGACGGGCAGCGCATCCGTCAGAAACTCCTGCTCAATGATCACGGCATCC 396558 Query 159860 GTCACAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGG 159919 |||| |||||| ||||| | | | | |||||| || | |||| |||| | Sbjct 396557 ATCACGATCTGCTGTACACGCGCCTCCTCAGGCTTGTGCACCAGGTGG---CGGAACATG 396501 Query 159920 AGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 ||||| ||||||||||||||||| |||| Sbjct 396500 AGGCATGCAAAGTCGCAGTGCAGACCCT 396473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794906664302800