Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07]
25,005 sequences; 885,534,757 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq3752 100 4e-16
seq668 98.7 1e-15
>seq3752
Length=176921
Score = 100 bits (110), Expect = 4e-16
Identities = 129/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| || ||||| || || || || ||||| | |||||| || ||||||||
Sbjct 10836 CCGATGAGCCGCTTGGCGTCGAACACGGTGTTCTCGGGGTTGGAGGTCAGCTGGTTCTTG 10895
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| ||||| ||||| ||||| || | |||| || ||||||||||| || || |
Sbjct 10896 GCGGCGTCGCCGATGAGACGCTCCCCCTCGGCCGTGAAGGCGACGTACGACGGCGTGATG 10955
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114
|| ||||| |||||||| || || || || |||||| |||| | ||||||| ||||
Sbjct 10956 CGGTTCCCCTGGTCGTTGGCGATTATCTCCACGCGGCCGTTCTTGAAGACGCCCACGC 11013
>seq668
Length=222624
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653
||||| || || || || || || || || || ||||| |||||||||||||| || |||
Sbjct 190569 TTCTTGTCAAGGCCATAGGCAATGGCTGCTGCTGTTGGCTCATTAATAATACGCAGCACA 190628
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
||||| || ||||| || | |||||||| || ||||| || || || ||||| || ||
Sbjct 190629 -TTCAGCCCTGCAATGGTGCCGGCATCTTTGGTGGCTTGCCGCTGTGAGTCGTTGAAATA 190687
Query 7714 GGCCGGGACCGTTACGACCGC 7734
|||||| || || || || ||
Sbjct 190688 GGCCGGTACAGTCACCACAGC 190708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634934281304200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |