Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq463 116 3e-21 >seq463 Length=246817 Score = 116 bits (128), Expect = 3e-21 Identities = 129/171 (75%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || ||||| || || ||||| || | ||||||||| ||||| || || |||||||| Sbjct 227307 CATATCGGTGTAGTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTC 227366 Query 30210 TCCCTCTTCCCTGTGCTCG---AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 30266 || ||||| | ||||| |||||| | ||||| ||| | | || |||||||| Sbjct 227367 TC---CTTCCTCGCGCTCGGGAAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGC 227423 Query 30267 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 |||||| ||||| || ||||| |||||||||| |||| || ||||| || Sbjct 227424 GTCCCAAATCTTGACGCCCTTGGCGGAGAGCTCCTTGGCATTGGTGGAACC 227474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408493074424865