Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq3217 84.2 4e-11 >seq3217 Length=33390 Score = 84.2 bits (92), Expect = 4e-11 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 161367 AGCTGGTCAGCCAGG-GCAGGCGCGGGTCCAGGTTCTCGATCGAGAACAGGGCGTTCTTG 161425 ||||||||||||| ||||||| ||||| |||||| | | ||||||| ||||| | Sbjct 16525 AGCTGGTCAGCCAAAAGCAGGCG-GGGTCGGTGTTCTCCACGGTGAACAGGACGTTCCCG 16467 Query 161426 ACCGGCACCACGAGGCCTTCCGGAACCGCCTTGATCAGGACCGGCAACTTGCC 161478 |||||||| ||| ||||||||| ||||||||||| | | |||| ||| || Sbjct 16466 ACCGGCACGACGGTGCCTTCCGGCACCGCCTTGATGCGCAGAGGCAGCTTCCC 16414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895486417014600