Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5270 138 2e-27 seq4486 93.3 8e-14 >seq5270 Length=36218 Score = 138 bits (152), Expect = 2e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| | || |||| || |||| ||| ||||| | |||||||| |||| Sbjct 24576 GCTGGCAGCCGCCGTGCACGTGCTTCATCACCTTCTGCTTGAGCCGCGCCACCTGCTCCC 24517 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 ||| || ||| | | ||| | ||||| | | |||||| |||| || | Sbjct 24516 TCAGGGCGCCCGCCGACGCCGCCAGCTCGGCGTTCTGCGTCTTGAGGCCCTTGACGCGAT 24457 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||| || ||||||||||| ||||| |||||| |||||| |||| |||||| | ||||| Sbjct 24456 CCTCGAGGCGCGCGATGCGCTCCAGCTTGCGCTTGCGGCACTTGGAGGCTGCGATGCGGT 24397 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 | || || | ||| || |||||||||||||| ||||| |||||||||||| || ||| Sbjct 24396 TGCGCAGCCGCTTGCGCTCCGCCTTGATGCGCTCCTGCGACTCCATGTCGATGGGCGAC 24338 >seq4486 Length=25203 Score = 93.3 bits (102), Expect = 8e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 ||||||| | ||||||| | ||| ||||||||||| || |||||||| ||||| || Sbjct 506 GCGTTGTTGGCCTTGAGCGCGGCCACCTTCTCCTCCAGGCGGGCGATGCGCTCCAGCTTC 447 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | | |||||| |||| ||||| | ||| || || || ||||| || ||| |||| || Sbjct 446 CTCTTGCGGCACTTGGACGCTGCGATGCGATTGCGCAGCCTCTTGCGCTCCACCTTCATC 387 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGACTTGG 241631 ||||| ||||||||| | ||| | | ||| Sbjct 386 TTCTCCTGCGACTCCATGTCCACCGGCGCCGTGG 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931241637779200