Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq18624 93.3 1e-13 >seq18624 Length=4383 Score = 93.3 bits (102), Expect = 1e-13 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || | ||||| ||||| || |||||||| | |||| Sbjct 2916 GTCTTGACGGCCGTGTCGATGAGGCCCTCGCGACCGCCCATGGCGTGGAAGAAGAACTCT 2857 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 || ||| || || | | ||||| |||| ||||| || |||| |||||| | Sbjct 2856 GTTGG-CGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGCGATTCGGGCCCGTA 2798 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | ||||| ||||| || | || || |||| | ||||| ||||| || Sbjct 2797 GTCGTCCTTGATGAAGTGCGGCAGCGTGCGGTGCTTGAAGCCAAACGGGATCCGCTTGCC 2738 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 2737 CTCCACGTTCTGCTGACCCA 2718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471346064136685