Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq668 111 1e-18 >seq668 Length=222624 Score = 111 bits (122), Expect = 1e-18 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || ||||| ||||| |||| || || || ||||| ||||||||||| | || ||| Sbjct 190569 TTCTTGTCAAGGCCATAGGCAATGGCTGCTGCTGTTGGCTCATTAATAATACGCAGCACA 190628 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || || ||||| | || |||||||| |||||||| | ||||| ||||| ||||| Sbjct 190629 TTCAGCCCTGCAATGGTGCCGGCATCTTTGGTGGCTTGCCGCTGTGAGTCGTTGAAATAG 190688 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 || || ||||| | || |||| |||||| Sbjct 190689 GCCGGTACAGTCACCACAGCATTTGTTAC 190717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739402760171130