Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq463 150 2e-31 >seq463 Length=246817 Score = 150 bits (166), Expect = 2e-31 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | ||||||||||||||| | |||||| || |||||||| Sbjct 226608 CTTGAGACCAGTGATGTGTGCAATCATGTAGGTGAGCAGTGCGTAGCTAGCGATGTTGAA 226667 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| ||||| || |||| ||| |||| | ||||||||||||||| || ||||| || || Sbjct 226668 GGGCACCCCAAGTCCCAGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATC 226727 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || ||||| || |||||||| |||||| || |||||||||||| Sbjct 226728 CGCGACGTAGAATTGGCACAGTGCGTGGCATGGAGGCAGCGCCATG 226773 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 ||| || ||||| | ||||||||||||||| || || |||||||| || || | | Sbjct 227322 GGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTCTCCTTCCTCGCGCTC 227381 Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 | |||||| ||| | || || | | || |||| ||||||||| || || || Sbjct 227382 GGGAAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGCGTCCCAAATCTTGACGCC 227441 Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 |||||||||||||||||| | | ||||| ||| ||| || Sbjct 227442 CTTGGCGGAGAGCTCCTTGGCATTGGTGGAACCCTGGAGGA 227482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583305623532000