Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq463 98.7 8e-16 >seq463 Length=246817 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111777 ACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCAC 111836 |||||||||||||||||||||||| ||||| || ||| ||||| ||||| || ||||| Sbjct 226614 ACCAGTGATGTGTGCAATCATGTAGGTGAGCAGTGCGTAGCTAGCGATGTTGAAGGGCAC 226673 Query 111837 ACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACAC 111896 || || |||| || |||||| || || ||||| ||||| || | | | || Sbjct 226674 CCCAAGTCCCAGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATCCGCGAC 226733 Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 || ||||| || ||| | || || ||||||| ||||| Sbjct 226734 GTAGAATTGGCACAGTGCGTGGCATGGAGGCAGCGCCAT 226772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391826155190815