Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq463 134 1e-26 >seq463 Length=246817 Score = 134 bits (148), Expect = 1e-26 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| ||||| || | |||||| |||||||| |||||| Sbjct 226612 AGACCAGTGATGTGTGCAATCATGTAGGTGAGCAGTGCGTAGCTAGCGATGTTGAAGGGC 226671 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 ||||| || |||| ||| | || | |||||| |||||||| || |||||||| || Sbjct 226672 ACCCCAAGTCCCAGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATCCGCG 226731 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 ||||| || || |||| || ||||| ||||| || |||||||| Sbjct 226732 ACGTAGAATTGGCACAGTGCGTGGCATGGAGGCAGCGCCATGAG 226775 Score = 102 bits (112), Expect = 7e-17 Identities = 114/151 (75%), Gaps = 6/151 (4%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG- 30073 |||| || | ||||||||| ||||| || || |||||||||| ||||| | ||||| Sbjct 227327 CGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTCTC---CTTCCTCGCGCTCGG 227383 Query 30074 --AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30131 |||||| | ||||| ||| | | || |||||||||||||| ||||| || |||| Sbjct 227384 GAAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGCGTCCCAAATCTTGACGCCCT 227443 Query 30132 TCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30162 | |||||||||| |||| || ||||| || Sbjct 227444 TGGCGGAGAGCTCCTTGGCATTGGTGGAACC 227474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406039422399430