Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq463 134 1e-26 >seq463 Length=246817 Score = 134 bits (148), Expect = 1e-26 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || | |||||| |||||||| ||||| Sbjct 226612 AGACCAGTGATGTGTGCAATCATGTAGGTGAGCAGTGCGTAGCTAGCGATGTTGAAGGGC 226671 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 ||||| || |||| ||| |||| | |||||| ||||| || || ||||||||||| Sbjct 226672 ACCCCAAGTCCCAGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATCCGCG 226731 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| || || || | |||||||| ||||| || |||||||| Sbjct 226732 ACGTAGAATTGGCACAGTGCGTGGCATGGAGGCAGCGCCATGAG 226775 Score = 111 bits (122), Expect = 1e-19 Identities = 128/171 (75%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || ||||| || || ||||| || | ||| ||||| ||||| || || |||||||| Sbjct 227307 CATATCGGTGTAGTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTC 227366 Query 27549 TCCCTCTTCCCTGTGCTCG---AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 27605 || ||||| | ||||| |||||| | ||||| ||| | | || |||||||| Sbjct 227367 TC---CTTCCTCGCGCTCGGGAAAGCCCTGCCGGTCCAGGAAGGCCCGCGAGCCGTTGGC 227423 Query 27606 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| ||||| || ||||| |||||||||| |||| || ||||| || Sbjct 227424 GTCCCAAATCTTGACGCCCTTGGCGGAGAGCTCCTTGGCATTGGTGGAACC 227474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369394593258155