Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq11215 149 9e-31 >seq11215 Length=8704 Score = 149 bits (164), Expect = 9e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || ||||| |||||||||||||||||| | || ||||||||| |||| |||||||||| Sbjct 6788 CCCCCGAATGTGCTGGGCTTCCAGTACTCGGGCGAGCAGATGGGGTTCCCCATGAGGCCC 6729 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 ||||| ||||| || || |||| ||| | || |||| |||||||| ||| ||| || Sbjct 6728 TTGAGAGAGAAGGGGGCGCCCATCTCCACCATCGTCTCGCCGAAGATAGCGCCGGGCCGC 6669 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554 ||| ||||| | || || | ||| ||||||| ||||| ||||||||||| | | Sbjct 6668 GGCCGTTCCAGGATGAGCCCCGGGTAGAGCTCCAGGGCCTCCACGTCTCCGTACATCTCG 6609 Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 | || || || || |||||| | || ||||| Sbjct 6608 CGCAGCTCCGCGGCCATCTCCGTCTCGCCTGT 6577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716652731195200