Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000006.1 Length=35100 Score E Sequences producing significant alignments: (Bits) Value seq416950 374 2e-99 seq1393656 125 1e-24 >seq416950 Length=5269 Score = 374 bits (414), Expect = 2e-99 Identities = 1263/1943 (65%), Gaps = 54/1943 (3%) Strand=Plus/Plus Query 5454 GGGTCAAAAACCAGTTTTCCCCCGTTCTTTTTGATGCGCTTCTTACCTCGCGTCTCCATG 5513 || |||||||| || || || || || || || ||||| | ||||||| ||||||| Sbjct 821 GGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATG 880 Query 5514 AGTCTGTGTCCGCGCTCGGTGACAAACAGGCTGTCGGTGTCCCCGTAGACGGACTTGATT 5573 || | ||| || ||||| ||||||| |||||| |||||||||||||| || || || Sbjct 881 AGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATA 940 Query 5574 GGCCTGTCCTGCAGGGGCGTCCCGCGGTCCTCCTCGTAGAGAAACTCGGACCACTCTGAG 5633 | | | || || ||| | || | ||| || |||| | ||| || | |||||| || Sbjct 941 GTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGAC 1000 Query 5634 ACAAAGGCGCGCGTCCACGCCAAGACAAAGGAGGCCACGTGCGAGGGGTAGCGGTCGTTG 5693 ||||| | | ||||| ||||| ||||| || || | ||| || | ||| | || ||| Sbjct 1001 ACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTT 1060 Query 5694 TCCACCAGGGGGTCCACCTTTTCCACCGTGTGCAGACACATGTCCCCTTCCTCCGCATCC 5753 || | | || ||||| | ||||| | || ||||| | || || | || Sbjct 1061 TCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCT 1120 Query 5754 AAGAAGGTGATTGGCTTGTAGGTGTAGGCCACGTGACCAGGGGTCCCCGACgggggggTA 5813 || || ||||||||||| || | || | |||||||| | | ||||| Sbjct 1121 AAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTT-----------GGGTA 1169 Query 5814 TAAAAGGGGGCGGGTCTGTGCTCGTCCTCACTCTCTTCCGCGTCGCTGTCCACGAGCGCC 5873 ||||| ||| | ||| | | || ||||| || || | || || | Sbjct 1170 TAAAAAGGGTGTGCTCTTCGTTT-TCATCACTTTCATC----TAACT---------CGGC 1215 Query 5874 AGCTGTTGG-GGTAGGTATTCCCTCTCGAGAGCGGGCATGACCTCGGCACTCAGGTTGTC 5932 || | || ||| |||| | | | | ||||| | || ||||| | |||||| Sbjct 1216 AGAAGGTGCAGGTGGGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTAAAGTTGTC 1275 Query 5933 AGTTTCTAGAAACGAGGAGGATTTGATGTTGGCTTGCCCTGCCGCAATGCTTTTT-AGGA 5991 |||||||| || || || ||||||||| | ||| || ||| ||||| | | Sbjct 1276 AGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTTTTTGACGC 1335 Query 5992 GACTTTCATCCATCTGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCAAAGG 6051 | || | || | ||||| ||||| || |||||||| ||||| | || ||||||||| Sbjct 1336 G-CTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTGGCAAAGC 1394 Query 6052 AGCCATAGAGGGCGTTGGAGAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCAC 6111 |||||| | ||||||||| || ||||| || ||| || |||||| || || || || Sbjct 1395 TGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTT 1454 Query 6112 GGTCGGCGCGCTCCTTGGCCGCGATGTTGAGCTGGACATATTCGCGCGCGACACACTTCC 6171 ||| || || ||||| ||||||| ||||| || ||||| || || ||||||| Sbjct 1455 TGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGCACTTCC 1514 Query 6172 ATTCGGGAAAGACGGTGGTGCGCTCGTCGGGCACGATCCTGACGCGCCAGCCGCGGTTAT 6231 | || || |||| ||| || | ||||| || | || | || ||| || | ||| | Sbjct 1515 ACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCTCTGTTGT 1574 Query 6232 GCAGGGTGACCAGGTCCACGCTGGTGGCCACCTCGCCGCGCAGGGGCTCGTTAGTCCAGC 6291 ||| || | || ||| | || || || || || |||| |||||||||||||||| Sbjct 1575 GCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTAGTCCAGC 1634 Query 6292 AGAGTCTGCCGCCCTTGCGCGAGCAGAACGGGGGCAGCACATCAAGCAGATGCTCGTCAG 6351 | || || ||||| || | ||||| ||||| ||||| ||||||| | |||||| | Sbjct 1635 ACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAACTCGTCTG 1694 Query 6352 GGGGGTCCGCATCGATGGTGAAGATGCCGGGACAGAGTTTCTTGTCAAAATAGTCTATTT 6411 | || ||||| ||||||||||| ||||| ||| || || |||||||||||| |||| Sbjct 1695 GAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAATAGTCAATTT 1754 Query 6412 TTGAGGATGC----ATCATCCAAGGCCATCTG--CCACTCGCGGGCGGCCATTGCTCGCT 6465 || ||| | | ||| || |||| ||| || || || | |||| | Sbjct 1755 TT-----TGCTCTAAGTTTTCAA-GCTTTCTGATCCATTCTGTCGCAGCTAAGGCTCTTT 1808 Query 6466 CGTAGGGGTTGAGGGGCGGACCCCACGGCATGGGATGCGTGAGGGCGGAGGCGTACATGC 6525 | || || || | ||| | || | || | |||||||| || || ||| ||||||| Sbjct 1809 CATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCATACATGC 1868 Query 6526 CGCAAATGTCGTAAACATAGATGGGCTCCGAGAAGATGCCGATGTTGGTGGGATAACAGC 6585 |||| ||||| || ||||| || |||| | |||||| || | |||||||| |||| Sbjct 1869 CGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGATAGCAGC 1928 Query 6586 GCCCCCCGCGGATGCTGGCGCGCACGTATTCATACAACTCGTGCGA-GGGGCCAAGAAGG 6644 | || || |||||||| ||| ||||| ||||||| || || || || || || || Sbjct 1929 GACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCTAATAA-A 1987 Query 6645 CCGGGGCCGAAATTGGTGCGCTGGGGCTGCTCGGCGCGGAAAACAATCTGGCGAAAGATG 6704 || | | || || | | ||| | | | | | | || || ||| || Sbjct 1988 ACGTTGTCTAAGTTTGCTTTATTTGGCCTAACTTCTCTGTATAATATTTGCTTAAAAATT 2047 Query 6705 GCGTGCGAGTTGGAGGAGATGGTGGGCCGTTGGAAGATGTTAAAGTGGGCGTGGGGCAAG 6764 || || ||||| ||| || ||||| | ||| || |||||||| || | || ||| Sbjct 2048 GCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATCAGGTAAG 2107 Query 6765 CGGAC-CGAGTCGCGGATGAAGTGCGCGTAGGAGTCTTGCAGCTTGGCGACGAACTCGGC 6823 || ||| || || |||| ||| || ||||| || ||| || | | | Sbjct 2108 TTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTAGGGCCGA 2166 Query 6824 GGTGACGAGAACGTCCATGGCGCAGTAGTCCAGCGTTTCGCGGATGATGTCATAACCCGC 6883 || || | ||||| | || |||| |||||||| |||| ||||| ||| || | Sbjct 2167 TGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGTAAGCCCC 2226 Query 6884 CTCTCCTTTCTTCTC-CCACAGCTCGCGGTTGAGGGCGTATTCCTCGTCATCCTTCCAGT 6942 | | ||| ||||| |||||| | |||||| || || ||| ||||||| Sbjct 2227 CAC-GTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGGATTTCCAGT 2285 Query 6943 ACTCCCGGAGCGGGAATCCTCGATCGTCCGCACGGTAAGAGCCCAGCATGTAGAAATGGT 7002 | || || || || || || ||||||| || | | ||||| | | Sbjct 2286 ATCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTATAGAATTCAT 2345 Query 7003 TCACGGCCTTGTAGGGACAGCAGCCCTTCTCCACGGGGAGGGCGTAAGCTTGTGCGGCCT 7062 | || || | ||| ||||||| || || || || || || ||||||| || || | Sbjct 2346 TTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCCCCAGCAGCAT 2405 Query 7063 TGC-GGAGCGAGGTGTGCGTCAGGGCGAAGGTGTCCCTGACCATGACTTTCAAGAACTGG 7121 | | ||| | ||||| ||||| || || ||||| || ||||| | ||| | |||||| Sbjct 2406 TTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAATTTAACAAACTGG 2464 Query 7122 TACTTGAAATCCGAGTCGTCGCAGC-CGCCGTGCTCCCATAGCTCGAAATCGGTGCGCTT 7180 |||||| |||| | | | ||| || |||||| ||||||| | || || Sbjct 2465 TACTTGTGGTCCGCGGC-TGTGAGCTTTCCACACTCCCAATCGGCGAAATCTTTTCG-TT 2522 Query 7181 CTTCG-AGAGGGGGTTAGGCAGAGC-GAAAGTGACGTCATTGAAGAGAATCTTGCCTGCT 7238 |||| | || ||||| | ||| |||| | ||||||||| || || || || | Sbjct 2523 TTTCGTACTTTGGATTAGGTA-AGCAAAAAGAAATGTCATTGAACAGTATTTTACCGTTT 2581 Query 7239 CGCGGCATGAAATTGCGGGTGATGCGGAAAGGGCCCGGGACGGAGGCTCGGTTGTTGATG 7298 | ||||| ||||| | | || ||||| | | || | || ||||| ||| Sbjct 2582 CTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCCGTTCTGTTGTGTATG 2641 Query 7299 ACCTGGGCGGCGAGGACGATCTCGTCGAAGCCGTTGATGTTGTGCCCGACGATGTAGAGT 7358 || || ||||| | |||||||| || || ||| ||||||||| || | | || | | Sbjct 2642 ACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCCAATTACATAAATT 2701 Query 7359 TCCATGAATCGCGGGCGGCCTTT 7381 || || || | || | |||||| Sbjct 2702 TCAATAAACTGTGGACTGCCTTT 2724 Score = 127 bits (140), Expect = 4e-25 Identities = 376/574 (66%), Gaps = 8/574 (1%) Strand=Plus/Plus Query 8452 GCGGTTGACATCCTGGATCTGCCGCCTCTGCGTGAAGACCACTGGCCCCGTGACTTTGAA 8511 |||||||| | ||| |||| |||| | || |||||||| || || ||| |||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8512 CCTGAAAGACAGTTCAACAGAATCAATCTCGGCGTCATTGACGGCGGGCTGACGCAGGAT 8571 ||||||||| | ||| | ||| ||||| || |||||||| || || || | || Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8572 CTCTTGCACGTCGCCCGAGTTGTCCTGGTAGGCGATCTCGGACATGAACTGCTCGATCTC 8631 ||| |||||| || ||| || || || || || || | ||| |||||||| ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8632 CTCCTCCTGGAGATCGCCGCGACCCGCGCGCTCCACGGTGGCGGCGAGGTCATTCGAGAT 8691 |||| || | || || | || || | ||| || ||||| || | |||| | || Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8692 GCGACCCATGA-GCTGCGAGAAGGC-GCCCAGGCCGCTCTCGTTCCAGACGCGGCTGTAG 8749 |||| ||||| | | | | ||| | | | || | || ||||| || | |||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTTC--CCCATTTTCATTCCACACTCTGCTGTAC 3987 Query 8750 ACCACGTCCCCGTCGGCGTCGCGCGCGCGCATGACCACCTGCGCGAGGTTGAGCTCCACG 8809 || | | || || ||| | || | ||| || |||||||| || || ||| ||| Sbjct 3988 ACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACA 4047 Query 8810 TGCCGCGCGAAGACGGCGTAGTTGCGC--AGGCGCTGGAAGAGGTAGTTGAGGGTGGTGG 8867 | | | | | | || | || | | | | | || | |||||| || ||||| | Sbjct 4048 TATCTCCC--AAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAG 4105 Query 8868 CGATGTGCTCGGTGACGAAGAAGTACATGATCCAGCGGCGCAGGGGCATCTCGCTGATGT 8927 | ||||| || | || || ||| |||| | |||||| | || | | || | |||| Sbjct 4106 CAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGT 4165 Query 8928 CGCCGATGGCCTCCAGCCTTTCCATGGCCTCGTAGAAATCCACGGCGAAGTTGAAAAACT 8987 | || | ||||||| | | || |||| || |||| || || ||||| ||||||| Sbjct 4166 CACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACT 4225 Query 8988 GGGCGTTGCGGGCCGAGACCGTGAGCTCGTCTTC 9021 | ||| | || || || |||||||| ||||| Sbjct 4226 GCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 125 bits (138), Expect = 1e-24 Identities = 355/540 (66%), Gaps = 8/540 (1%) Strand=Plus/Plus Query 8486 AAGACCACTGGCCCCGTGACTTTGAACCTGAAAGACAGTTCAACAGAATCAATCTCGGCG 8545 || |||||||| || || ||| ||||||||||||| | ||| | ||| ||||| || ||| Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 8546 TCATTGACGGCGGGCTGACGCAGGATCTCTTGCACGTCGCCCGAGTTGTCCTGGTAGGCG 8605 ||||| || || || | ||||| |||||| || ||| || || || || Sbjct 92 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 151 Query 8606 ATCTCGGACATGAACTGCTCGATCTCCTCCTCCTGGAGATCGCCGCGACCCGCGCGCTCC 8665 || || | ||| |||||||| ||||| |||| || | || || | || || | ||| Sbjct 152 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 211 Query 8666 ACGGTGGCGGCGAGGTCATTCGAGATGCGACCCATGA-GCTGCGAGAAGGC-GCCCAGGC 8723 || ||||| || | |||| | |||||| ||||| | | | | ||| | | | | Sbjct 212 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC--CC 269 Query 8724 CGCTCTCGTTCCAGACGCGGCTGTAGACCACGTCCCCGTCGGCGTCGCGCGCGCGCATGA 8783 | | || ||||| || | |||||| || | | || || ||| | || | ||| | Sbjct 270 CATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTA 329 Query 8784 CCACCTGCGCGAGGTTGAGCTCCACGTGCCGCGCGAAGACGGCGTAGTTGCGC--AGGCG 8841 | |||||||| || || ||| ||| | | | | | | || | || | | | | | Sbjct 330 CTACCTGCGCCAGATTAAGCATCACATATCTCCC--AAAAGGGGAAGATACCCTAATTTG 387 Query 8842 CTGGAAGAGGTAGTTGAGGGTGGTGGCGATGTGCTCGGTGACGAAGAAGTACATGATCCA 8901 || | |||||| || ||||| || ||||| || | || || ||| |||| | ||| Sbjct 388 GTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCA 447 Query 8902 GCGGCGCAGGGGCATCTCGCTGATGTCGCCGATGGCCTCCAGCCTTTCCATGGCCTCGTA 8961 ||| | || | | || | ||||| || | ||||||| | | || |||| || Sbjct 448 GCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATA 507 Query 8962 GAAATCCACGGCGAAGTTGAAAAACTGGGCGTTGCGGGCCGAGACCGTGAGCTCGTCTTC 9021 |||| || || ||||| |||||||| ||| | || || || |||||||| ||||| Sbjct 508 AAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98536827944580