Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000007.1 Length=35937 Score E Sequences producing significant alignments: (Bits) Value seq416950 309 6e-80 seq1393656 167 5e-37 >seq416950 Length=5269 Score = 309 bits (342), Expect = 6e-80 Identities = 1437/2245 (64%), Gaps = 78/2245 (3%) Strand=Plus/Plus Query 5104 CGGTTTGAGGCCGTCCGCCGTAGGCAT-GCTTTTGAGCGTTTGACCAAGCAGTTCCAGGC 5162 |||||| || || || | |||||| |||||| ||| |||| | ||| ||| Sbjct 279 CGGTTTAAGCCCTTCAGAATAAGGCATAGCTTTTAAGCTTTTGTTGA-GCACAGACAGTT 337 Query 5163 GGTCCCACAGCTCGGTCACGTGCTCTACGGCA-TCTCGATCCAGCATATCTCCTCGTTTC 5221 |||||||| || | || || || |||||| | || ||||| |||| || | ||||| Sbjct 338 TATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTC 396 Query 5222 GCGGGTTGGGGCGGCTTTCGCTGTACGGCAGTAGTCGGTGCTCGTCCAGACGGGCCAGGG 5281 ||||| || | ||||| ||| |||| || ||||| |||| | | |||| Sbjct 397 TTGGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGG 455 Query 5282 TCATGTCTTTCCACGGGCGCAGGGTCCTCGTCAGCGTAGTCTGGGTCACGGTGAAGGGGT 5341 || |||||||||| || | || || | ||| | || || | ||| || ||||| ||| Sbjct 456 TCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGGG 515 Query 5342 GCGCTCCGGGCTGCGCGCTGGCCAGGGTGCGCTTGAGGCTGGTCCTGCTGGTGCTGAAGC 5401 ||| | || | || ||||| || || | || | ||||||| |||| Sbjct 516 CCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAAGC 575 Query 5402 GCTGCCGGTCTTCGCC--CTGCGCGTCGGCCAGGTAGCATTTGACCATGGTGTCATAGTC 5459 |||| | || || ||||||||| | || ||||||||| ||| |||||||| Sbjct 576 GCTGGC-----TCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAAAGTGTCATAACA 630 Query 5460 CAGCCCCTCCGCGGCGTGGCCCTTGGCGCGCAGCTTGCCCTTGGAGGAGGCGCCGCACGA 5519 | | | || || ||||| || ||||| || || || | ||| ||| Sbjct 631 TAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCC-ACATGCC-CACA- 687 Query 5520 GGGGCAGTGCAGAC-----TTTTAAGGGCGTAGAGCTTGGGCGCGAGAAATACCGATTCC 5574 | ||| || || |||| | || || || || || |||||||| || ||||| Sbjct 688 --GCAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCA 745 Query 5575 GGGGAGTAGGCATCCGCGCCGCAGGCCCCGCAGACGGTCTCGCATTCCACGAGCCAGGTG 5634 | | ||||| | || | || ||||| ||||| || | ||| || Sbjct 746 GAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTA 805 Query 5635 AGCTCTGGCCGTTCGGGGTCAAAAACCAGGTTTCCCCCATGCTTTTTGATGCGTTTCTTA 5694 | ||| || || |||||||| || || || |||| || || ||||| | ||| Sbjct 806 ATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTA 865 Query 5695 CCTCTGGTTTCCATGAGCCGGTGTCCACGCTCGGTGACGAAAAGGCTGTCCGTGTCCCCG 5754 ||||| |||||||||||||| || ||||| || || | |||||| ||||||||| Sbjct 866 CCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCG 925 Query 5755 TATACAGACTTGAGAGGCCTGTCCTCGAGCGGTGTTCCGCGGTCCTCCTCGTATAGAAAC 5814 || ||||| || | || | | | || || |||| | ||| || |||||| ||| Sbjct 926 TAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAAT 985 Query 5815 TCGGACCACTCTGAGACGAAGGCTCGCGTCCAGGCCAGCACGAAGGAGGCTAAGTGGGAG 5874 || | |||||| || || || ||| |||||||||| || || || || | |||||| Sbjct 986 TCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAA 1045 Query 5875 GGGTAGCGGTCGTTGTCCACTAGGGGGTCCACTCGCT--CCAGGGTGTGAAGACACATGT 5932 | ||| | || ||| || | || || | | | | | | ||||| | || |||| Sbjct 1046 GCGTACCTGTTGTTTTCTATTAAAGGAG--AGTTGTTTTCTAAAGTGTGTAAGCATATGT 1103 Query 5933 CGCCCTCTTCGGCATCAAGGAAGGTGATTGGTTTATAGGTGTAGGCCACGTGACCGGGTG 5992 | | ||||| | || | || |||||||| ||||| | || | |||||||| | Sbjct 1104 CATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTT 1163 Query 5993 TTCCTGAAggggggctataaaagggggtgggggCGCGTTCGTCCTCACTCTCTTCCGCAT 6052 | || ||||||| ||| | || | ||||| ||| || ||| | || Sbjct 1164 T-----------GGGTATAAAAAGGGT---GTGCTC-TTCGTTTTCA-TCACTTTC--AT 1205 Query 6053 CGCTGTCTGC-GAGGGCCAGCTGTTGGGGTGAGTACTCCCTCTCAAAAGCGGGCATGACT 6111 | || || || || || | |||| | || || | | ||| | ||||| | | Sbjct 1206 CTAACTCGGCAGAAGGT--GCAGGTGGG-TAAG--CTACGAC--AAATTCTGGCATAATT 1258 Query 6112 TCTGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCG 6171 || || |||| ||||||||||| | || || || |||||||| | | || | Sbjct 1259 TCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTG 1318 Query 6172 GTGATGCCTTTGAGGGTGGCCGCGTCCATCTGGTCAGAAAAGACAATCTTTTTGTTGTCA 6231 | |||| ||| | | || || | ||||| ||||| ||||| ||||||||||| Sbjct 1319 GCGATGGTTTTTGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCC 1378 Query 6232 AGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGG 6291 | || |||||||| || || | ||||||||| || | ||| || ||| |||| | Sbjct 1379 AATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATG 1438 Query 6292 GTTTGGTTTTTGTCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 6351 |||||||| || || || || || ||||| |||||||||||||||||||||| Sbjct 1439 GTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCT 1498 Query 6352 CGCGCAACGCACCGCCATTCGGGAAAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACG 6411 || |||||| ||| || || |||| ||| || | ||||| || | | | |||| Sbjct 1499 TTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACT 1558 Query 6412 CGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTGGCTACCTCTCCGCGTAGG 6471 ||| || | |||||||| || | | ||| | || ||||| ||||| || | Sbjct 1559 GCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAA 1618 Query 6472 CGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAACAGAATGGCGGTAGTGGGTCT 6531 ||||||| |||||||| || | ||||| || | || || || || || ||| || Sbjct 1619 GGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCA 1678 Query 6532 AGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGCAGCAGGCGCGCG 6591 || | |||||| || || || ||||| | ||| || | || || || || | | || Sbjct 1679 AGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCG 1738 Query 6592 TCGAAGTAGTCTATCTTGCATCCTTGC---AAG-TCTAGCGCCTGCTG--CCATGCGCGG 6645 || || ||||| || || |||| ||| | | || | ||| |||| | Sbjct 1739 TCAAAATAGTCAATTTT------TTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTC 1792 Query 6646 GCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGAGC 6705 || || | || | || || || || | || | || | || | || || || || Sbjct 1793 GCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGA 1852 Query 6706 GCGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGA 6765 || ||| ||||||||||| ||||| || || || | |||| | | || |||| | Sbjct 1853 GCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATA 1912 Query 6766 TATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGC 6825 || || || ||||| | ||||| |||||||| ||| ||||| || || | ||| || Sbjct 1913 TAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGA 1972 Query 6826 GAGGGAGCGAGGAGGTCG-GGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAAGAC 6884 || || || | | || | | || ||||| || || || ||| | | | Sbjct 1973 GATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCT-AACTTCTCTGTATAA 2031 Query 6885 TATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTGGAAGACGTTGAA 6944 ||| ||| | || || ||||| ||||| || || || || | || || | ||| || Sbjct 2032 TATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAA 2091 Query 6945 GCTGGCGTCTGTGAGACCTACCGCGTCACGC-ACGAAGGAGGCGTAGGAGTCGCGCAGCT 7003 || || | | | | | | | || | ||| ||| || || | || | Sbjct 2092 TGAAGCATCAG-GTAAGTTCACTTGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGAGTT 2150 Query 7004 TGTTGACCAGCTCGGCGGTGACCTGCACGTCTAGGGCGCAGTAGTCCAGGGTTTCCTTGA 7063 |||| || || | | || || ||||||| | | || |||| ||| |||| || || Sbjct 2151 TGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGA 2210 Query 7064 TGATGTCATACTTATCCTGTCCCttttttt---tCCACAGCTCGCGGTTGAGGACAAACT 7120 | ||||| || | || | ||||||| ||||||| | |||||| | ||| Sbjct 2211 TTATGTCGTA---AGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACT 2267 Query 7121 CTTCGCGGTCTTTCCAGTACTCTT-GGATCGGAAACCCGTCGGCCTCCGAACGGTAAGAG 7179 |||||| | ||||||||| |||| || | ||||| || || | || ||||||| Sbjct 2268 CTTCGCTGGATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGAC 2326 Query 7180 CCTAGCATGTAGAACTGGTTGACGGCCTGGTAGGCGCAGCATCCCTTTTCTACGGGTAGC 7239 |||| | ||||| | || || || | ||| | |||| ||| |||||||| || ||| Sbjct 2327 CCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGC 2386 Query 7240 GCGTATGCCTGCGCGGC-CTTCCGGAGCGAGGTGTGGGTGAGCGCAAAGGTGTCCCTAAC 7298 |||| ||| || || ||| ||| | |||||||| |||||||| ||||| || || Sbjct 2387 TCGTAAGCCCCAGCAGCATTTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTAC 2445 Query 7299 CATGACTTTGAGGTACTGGTATTTG 7323 ||| | ||| | ||||||| ||| Sbjct 2446 CATAAATTTAACAAACTGGTACTTG 2470 Score = 172 bits (190), Expect = 1e-38 Identities = 386/574 (67%), Gaps = 8/574 (1%) Strand=Plus/Plus Query 8714 GCGGTTGATCTCCTGAATCTGGCGCCTCTGCGTGAAGACGACGGGCCCGGTGAGCTTGAA 8773 ||||||||| | |||||||| ||| | || || || || ||||| | |||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8774 CCTGAAAGAGAGTTCGACAGAATCAATTTCGGTGTCGTTGACGGCGGCCTGGCGCAAAAT 8833 ||||||||| | ||| | ||| ||||| || | ||| || || || | || ||||| Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8834 CTCCTGCACGTCTCCTGAGTTGTCTTGATAGGCGATTTCGGCCATGAACTGCTCGATCTC 8893 ||| ||||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8894 TTCCTCCTGGAGATCTCCGCGTCCGGCTCGCTCCACGGTGGCGGCGAGGTCGTTGGAGAT 8953 ||||| || | ||||| | || |||| ||| || ||||| || | ||| || || Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8954 GCGGGCCATGA-GCTGCGAGAAGGC-GTTGAGGCCTCCCTCGTTCCAGACGCGGCTGTAG 9011 ||| | ||||| | | | | ||| | ||| || || ||||| || | |||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGCTGTAC 3987 Query 9012 ACCACGCCCCCTTCGGCATCGCGGGCGCGCATGACCACCTGCGCGAGATTGAGCTCCACG 9071 || | || || | | | ||| | ||| || |||||||| ||||| ||| ||| Sbjct 3988 ACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACA 4047 Query 9072 TGCCGGGCGAAGACGGCGTAGTTTCGC--AGGCGCTGAAAGAGGTAGTTGAGGGTGGTGG 9129 | | | | | || | || | | | | | ||| | |||||| || ||||| | Sbjct 4048 TATC--TCCCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAG 4105 Query 9130 CGGTGTGTTCTGCCACGAAGAAGTACATAACCCAGCGTCGCAACGTGGATTCGTTGATAT 9189 | ||||||||||||| || ||| |||| ||||||||| | | || | ||| || || | Sbjct 4106 CAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGT 4165 Query 9190 CCCCCAAGGCCTCAAGGCGCTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTGAAAAACT 9249 | || | ||||| | |||| || |||| || || | || || ||||| ||||||| Sbjct 4166 CACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACT 4225 Query 9250 GGGAGTTGCGCGCCGACACGGTTAACTCCTCCTC 9283 | ||| | || ||||| || | ||| || || Sbjct 4226 GCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 167 bits (184), Expect = 5e-37 Identities = 383/571 (67%), Gaps = 8/571 (1%) Strand=Plus/Plus Query 8717 GTTGATCTCCTGAATCTGGCGCCTCTGCGTGAAGACGACGGGCCCGGTGAGCTTGAACCT 8776 |||||| | |||||||| ||| | || || || || ||||| | ||||||| Sbjct 1 GTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAACCT 60 Query 8777 GAAAGAGAGTTCGACAGAATCAATTTCGGTGTCGTTGACGGCGGCCTGGCGCAAAATCTC 8836 |||||| | ||| | ||| ||||| || | ||| || || || | || |||||||| Sbjct 61 GAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAATCTC 120 Query 8837 CTGCACGTCTCCTGAGTTGTCTTGATAGGCGATTTCGGCCATGAACTGCTCGATCTCTTC 8896 ||||||||| ||| || ||||| || ||||| ||||| |||||||| |||||||| Sbjct 121 ACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTCTTC 180 Query 8897 CTCCTGGAGATCTCCGCGTCCGGCTCGCTCCACGGTGGCGGCGAGGTCGTTGGAGATGCG 8956 || || | ||||| | || |||| ||| || ||||| || | ||| || ||||| Sbjct 181 CTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAATGCG 240 Query 8957 GGCCATGA-GCTGCGAGAAGGC-GTTGAGGCCTCCCTCGTTCCAGACGCGGCTGTAGACC 9014 | ||||| | | | | ||| | ||| || || ||||| || | |||||| || Sbjct 241 AGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGCTGTACACA 298 Query 9015 ACGCCCCCTTCGGCATCGCGGGCGCGCATGACCACCTGCGCGAGATTGAGCTCCACGTGC 9074 | || || | | | ||| | ||| || |||||||| ||||| ||| ||| | Sbjct 299 ATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACATAT 358 Query 9075 CGGGCGAAGACGGCGTAGTTTCGC--AGGCGCTGAAAGAGGTAGTTGAGGGTGGTGGCGG 9132 | | | | || | || | | | | | ||| | |||||| || ||||| || Sbjct 359 C--TCCCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAGCAA 416 Query 9133 TGTGTTCTGCCACGAAGAAGTACATAACCCAGCGTCGCAACGTGGATTCGTTGATATCCC 9192 ||||||||||||| || ||| |||| ||||||||| | | || | ||| || || || | Sbjct 417 TGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGTCAC 476 Query 9193 CCAAGGCCTCAAGGCGCTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTGAAAAACTGGG 9252 | | ||||| | |||| || |||| || || | || || ||||| |||||||| Sbjct 477 CTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACTGCT 536 Query 9253 AGTTGCGCGCCGACACGGTTAACTCCTCCTC 9283 ||| | || ||||| || | ||| || || Sbjct 537 GGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100889098921410