Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000008.1 Length=35938 Score E Sequences producing significant alignments: (Bits) Value seq416950 311 2e-80 seq1393656 163 6e-36 >seq416950 Length=5269 Score = 311 bits (344), Expect = 2e-80 Identities = 1574/2467 (64%), Gaps = 86/2467 (3%) Strand=Plus/Plus Query 5114 CGGTTTGAGACCGTCCGCCGTAGGCAT-GCTTTTGAGCGTTTGACCAAGCAGTTCCAGGC 5172 |||||| || || || | |||||| |||||| ||| |||| | ||| ||| Sbjct 279 CGGTTTAAGCCCTTCAGAATAAGGCATAGCTTTTAAGCTTTTGTTGA-GCACAGACAGTT 337 Query 5173 GGTCCCACAGCTCGGTCACCTGCTCTACGGCA-TCTCGATCCAGCATATCTCCTCGTTTC 5231 |||||||| || | || || || |||||| | || ||||| |||| || | ||||| Sbjct 338 TATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTC 396 Query 5232 GCGGGTTGGGGCGGCTTTCGCTGTACGGCAGTAGTCGGTGCTCGTCCAGACGGGCCAGGG 5291 ||||| || | ||||| ||| |||| || ||||| |||| | | |||| Sbjct 397 TTGGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGG 455 Query 5292 TCATGTCTTTCCACGGGCGCAGGGTCCTCGTCAGCGTAGTCTGGGTCACGGTGAAGGGGT 5351 || |||||||||| || | || || | ||| | || || | ||| || ||||| ||| Sbjct 456 TCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGGG 515 Query 5352 GCGCTCCGGGCTGCGCGCTGGCCAGGGTGCGCTTGAGGCTGGTCCTGCTGGTGCTGAAGC 5411 ||| | || | || ||||| || || | || | ||||||| |||| Sbjct 516 CCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAAGC 575 Query 5412 GCTGCCGGTCTTCGCC--CTGCGCGTCGGCCAGGTAGCATTTGACCATGGTGTCATAGTC 5469 |||| | || || ||||||||| | || ||||||||| ||| |||||||| Sbjct 576 GCTGGC-----TCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAAAGTGTCATAACA 630 Query 5470 CAGCCCCTCCGCGGCGTGGCCCTTGGCGCGCAGCTTGCCCTTGGAGGAGGCGCCGCACGA 5529 | | | || || ||||| || ||||| || || || | ||| ||| Sbjct 631 TAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCC-ACATGCC-CACA- 687 Query 5530 GGGGCAGTGCAGAC-----TTTTGAGGGCGTAGAGCTTGGGCGCGAGAAATACCGATTCC 5584 | ||| || || |||| | || || || || || |||||||| || ||||| Sbjct 688 --GCAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCA 745 Query 5585 GGGGAGTAGGCATCCGCGCCGCAGGCCCCGCAGACGGTCTCGCATTCCACGAGCCAGGTG 5644 | | ||||| | || | || ||||| ||||| || | ||| || Sbjct 746 GAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTA 805 Query 5645 AGCTCTGGCCGTTCGGGGTCAAAAACCAGGTTTCCCCCATGCTTTTTGATGCGTTTCTTA 5704 | ||| || || |||||||| || || || |||| || || ||||| | ||| Sbjct 806 ATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTA 865 Query 5705 CCTCTGGTTTCCATGAGCCGGTGTCCACGCTCGGTGACGAAAAGGCTGTCCGTGTCCCCG 5764 ||||| |||||||||||||| || ||||| || || | |||||| ||||||||| Sbjct 866 CCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCG 925 Query 5765 TATACAGACTTGAGAGGCCTGTCCTCGAGCGGTGTTCCGCGGTCCTCCTCGTATAGAAAC 5824 || ||||| || | || | | | || || |||| | ||| || |||||| ||| Sbjct 926 TAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAAT 985 Query 5825 TCGGACCACTCTGAGACAAAGGCTCGCGTCCAGGCCAGCACGAAGGAGGCTAAGTGGGAG 5884 || | |||||| || ||||| ||| |||||||||| || || || || | |||||| Sbjct 986 TCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAA 1045 Query 5885 GGGTAGCGGTCGTTGTCCACTAGGGGGTCCACTCGCT--CCAGGGTGTGAAGACACATGT 5942 | ||| | || ||| || | || || | | | | | | ||||| | || |||| Sbjct 1046 GCGTACCTGTTGTTTTCTATTAAAGGAG--AGTTGTTTTCTAAAGTGTGTAAGCATATGT 1103 Query 5943 CGCCCTCTTCGGCATCAAGGAAGGTGATTGGTTTGTAGGTGTAGGCCACGTGACCGGGTG 6002 | | ||||| | || | || |||||||| || || | || | |||||||| | Sbjct 1104 CATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTT 1163 Query 6003 TTCCTGAAggggggctataaaagggggtgggggCGCGTTCGTCCTCACTCTCTTCCGCAT 6062 | || ||||||| ||| | || | ||||| ||| || ||| | || Sbjct 1164 T-----------GGGTATAAAAAGGGT---GTGCTC-TTCGTTTTCA-TCACTTTC--AT 1205 Query 6063 CGCTGTCTGC-GAGGGCCAGCTGTTGGGGTGAGTACTCCCTCTGAAAAGCGGGCATGACT 6121 | || || || || || | |||| | || || | | ||| | ||||| | | Sbjct 1206 CTAACTCGGCAGAAGGT--GCAGGTGGG-TAAG--CTACGAC--AAATTCTGGCATAATT 1258 Query 6122 TCTGCGCTAAGATTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCG 6181 || || |||| ||||||||||| | || || || |||||||| | | || | Sbjct 1259 TCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTG 1318 Query 6182 GTGATGCCTTTGAGGGTGGCCGCATCCATCTGGTCAGAAAAGACAATCTTTTTGTTGTCA 6241 | |||| ||| | | || || | ||||| ||||| ||||| ||||||||||| Sbjct 1319 GCGATGGTTTTTGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCC 1378 Query 6242 AGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGG 6301 | || |||||||| || || | ||||||||| || | ||| || ||| |||| | Sbjct 1379 AATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATG 1438 Query 6302 GTTTGGTTTTTGTCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 6361 |||||||| || || || || || ||||| |||||||||||||||||||||| Sbjct 1439 GTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCT 1498 Query 6362 CGCGCAACGCACCGCCATTCGGGAAAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACG 6421 || |||||| ||| || || |||| ||| || | ||||| || | | | |||| Sbjct 1499 TTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACT 1558 Query 6422 CGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTGGCTACCTCTCCGCGTAGG 6481 ||| || | |||||||| || | | ||| | || ||||| ||||| || | Sbjct 1559 GCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAA 1618 Query 6482 CGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCGGTAGGGGGTCT 6541 ||||||| |||||||| || | ||||| || | ||||| || || || || || Sbjct 1619 GGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCA 1678 Query 6542 AGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGCAGCAGGCGCGCG 6601 || | |||||| || || || ||||| | ||| || | || || || || | | || Sbjct 1679 AGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCG 1738 Query 6602 TCGAAGTAGTCTATCTTGCATCCTTGC---AAG-TCTAGCGCCTGCTG--CCATGCGCGG 6655 || || ||||| || || |||| ||| | | || | ||| |||| | Sbjct 1739 TCAAAATAGTCAATTTT------TTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTC 1792 Query 6656 GCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGAGC 6715 || || | || | || || || || | || | || | || | || || || || Sbjct 1793 GCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGA 1852 Query 6716 GCGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGA 6775 || ||| ||||||||||| ||||| || || || | |||| | | || |||| | Sbjct 1853 GCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATA 1912 Query 6776 TATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGC 6835 || || || ||||| | ||||| |||||||| ||| ||||| || || | ||| || Sbjct 1913 TAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGA 1972 Query 6836 GAGGGAGCGAGGAGGTCG-GGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAAGAC 6894 || || || | | || | | || ||||| || || || ||| | | | Sbjct 1973 GATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCT-AACTTCTCTGTATAA 2031 Query 6895 TATCTGCCTGAAGATGGCATGTGAGTTGGATGATATGGTTGGACGCTGGAAGACGTTGAA 6954 ||| ||| | || || ||||| ||||| || || || || | || || | ||| || Sbjct 2032 TATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAA 2091 Query 6955 GCTGGCGTCTGTGAGACCTACCGCGTCACGC-ACGAAGGAGGCGTAGGAGTCGCGCAGCT 7013 || || | | | | | | | || | ||| ||| || || | || | Sbjct 2092 TGAAGCATCAG-GTAAGTTCACTTGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGAGTT 2150 Query 7014 TGTTGACCAGCTCGGCGGTGACCTGCACGTCTAGGGCGCAGTAGTCCAGGGTTTCCTTGA 7073 |||| || || | | || || ||||||| | | || |||| ||| |||| || || Sbjct 2151 TGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGA 2210 Query 7074 TGATGTCATACTTATCCTGTCCCttttttt---tCCACAGCTCGCGGTTGAGGACAAACT 7130 | ||||| || | || | ||||||| ||||||| | |||||| | ||| Sbjct 2211 TTATGTCGTA---AGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACT 2267 Query 7131 CTTCGCGGTCTTTCCAGTACTCTT-GGATCGGAAACCCGTCGGCCTCCGAACGGTAAGAG 7189 |||||| | ||||||||| |||| || | ||||| || || | || ||||||| Sbjct 2268 CTTCGCTGGATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGAC 2326 Query 7190 CCTAGCATGTAGAACTGGTTGACGGCCTGGTAGGCGCAGCATCCCTTTTCTACGGGTAGC 7249 |||| | ||||| | || || || | ||| | |||| ||| |||||||| || ||| Sbjct 2327 CCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGC 2386 Query 7250 GCGTATGCCTGCGCGGC-CTTCCGGAGCGAGGTGTGGGTGAGCGCAAAGGTGTCCCTGAC 7308 |||| ||| || || ||| ||| | |||||||| |||||||| ||||| || || Sbjct 2387 TCGTAAGCCCCAGCAGCATTTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTAC 2445 Query 7309 CATGACTTTGAGGTACTGGTATTTGAAGTCAGTGTC-GT-CGCATCCGCCCTGCTCCCA- 7365 ||| | ||| | ||||||| ||| ||| | | | || || | || |||||| Sbjct 2446 CATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTT--TCCACACTCCCAA 2503 Query 7366 -GAGCAAAAAGTCCGTGCGCTTTTTGGAACGCGGATTTGGCAGGGCGAAGGTGACATCGT 7424 || ||| || | || |||| | | ||||| || | | || | | || | Sbjct 2504 TCGGCGAAA--TCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCAT 2561 Query 7425 TGAAGAGTATCTTTCCCGCGCGAGGCATAAAGTTGCGTGTGATGCGGAAGGGTCCCGGCA 7484 |||| ||||| || || | |||||||| || | | || ||| | | | | Sbjct 2562 TGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAA 2621 Query 7485 CCTCGGAACGGTTGTTAATTACCTGGGCGGCGAGCACGATCTCGTCAAAGCCGTTGATGT 7544 | || | | ||||| || || || ||||| | ||||||||| ||||| ||| ||||| Sbjct 2622 CATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGT 2681 Query 7545 TGTGGCC 7551 ||||||| Sbjct 2682 TGTGGCC 2688 Score = 168 bits (186), Expect = 1e-37 Identities = 385/574 (67%), Gaps = 8/574 (1%) Strand=Plus/Plus Query 8724 GCGGTTGATCTCCTGAATCTGGCGCCTCTGCGTGAAGACGACGGGCCCGGTGAGCTTGAG 8783 ||||||||| | |||||||| ||| | || || || || ||||| | ||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8784 CCTGAAAGAGAGTTCGACAGAATCAATTTCGGTGTCGTTGACGGCGGCCTGGCGCAAAAT 8843 ||||||||| | ||| | ||| ||||| || | ||| || || || | || ||||| Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8844 CTCCTGCACGTCTCCTGAGTTGTCTTGATAGGCGATCTCGGCCATGAACTGCTCGATCTC 8903 ||| ||||||||| ||| || ||||| || || || ||||| |||||||| ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8904 TTCCTCCTGGAGATCTCCGCGTCCGGCTCGCTCCACGGTGGCGGCGAGGTCGTTGGAAAT 8963 ||||| || | ||||| | || |||| ||| || ||||| || | ||| || ||| Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8964 GCGGGCCATGA-GCTGCGAGAAGGC-GTTGAGGCCTCCCTCGTTCCAGACGCGGCTGTAG 9021 ||| | ||||| | | | | ||| | ||| || || ||||| || | |||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTTCC--CCATTTTCATTCCACACTCTGCTGTAC 3987 Query 9022 ACCACGCCCCCTTCGGCATCGCGGGCGCGCATGACCACCTGCGCGAGATTGAGCTCCACG 9081 || | || || | | | ||| | ||| || |||||||| ||||| ||| ||| Sbjct 3988 ACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACA 4047 Query 9082 TGCCGGGCGAAGACGGCGTAGTTTCGC--AGGCGCTGAAAGAGGTAGTTGAGGGTGGTGG 9139 | | | || || | || | | | | | ||| | |||||| || ||||| | Sbjct 4048 TATCTCCCAAAA--GGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAG 4105 Query 9140 CGGTGTGTTCTGCCACGAAGAAGTACATAACCCAGCGTCGCAACGTGGATTCGTTGATAT 9199 | ||||||||||||| || ||| |||| ||||||||| | | || | ||| || || | Sbjct 4106 CAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGT 4165 Query 9200 CCCCCAAGGCCTCAAGGCGCTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTGAAAAACT 9259 | || | ||||| | |||| || |||| || || | || || ||||| ||||||| Sbjct 4166 CACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACT 4225 Query 9260 GGGAGTTGCGCGCCGACACGGTTAACTCCTCCTC 9293 | ||| | || ||||| || | ||| || || Sbjct 4226 GCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 163 bits (180), Expect = 6e-36 Identities = 382/571 (67%), Gaps = 8/571 (1%) Strand=Plus/Plus Query 8727 GTTGATCTCCTGAATCTGGCGCCTCTGCGTGAAGACGACGGGCCCGGTGAGCTTGAGCCT 8786 |||||| | |||||||| ||| | || || || || ||||| | ||| ||| Sbjct 1 GTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAACCT 60 Query 8787 GAAAGAGAGTTCGACAGAATCAATTTCGGTGTCGTTGACGGCGGCCTGGCGCAAAATCTC 8846 |||||| | ||| | ||| ||||| || | ||| || || || | || |||||||| Sbjct 61 GAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAATCTC 120 Query 8847 CTGCACGTCTCCTGAGTTGTCTTGATAGGCGATCTCGGCCATGAACTGCTCGATCTCTTC 8906 ||||||||| ||| || ||||| || || || ||||| |||||||| |||||||| Sbjct 121 ACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTCTTC 180 Query 8907 CTCCTGGAGATCTCCGCGTCCGGCTCGCTCCACGGTGGCGGCGAGGTCGTTGGAAATGCG 8966 || || | ||||| | || |||| ||| || ||||| || | ||| || |||||| Sbjct 181 CTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAATGCG 240 Query 8967 GGCCATGA-GCTGCGAGAAGGC-GTTGAGGCCTCCCTCGTTCCAGACGCGGCTGTAGACC 9024 | ||||| | | | | ||| | ||| || || ||||| || | |||||| || Sbjct 241 AGACATGATGTTACTAAAAGCCTGTTCC--CCATTTTCATTCCACACTCTGCTGTACACA 298 Query 9025 ACGCCCCCTTCGGCATCGCGGGCGCGCATGACCACCTGCGCGAGATTGAGCTCCACGTGC 9084 | || || | | | ||| | ||| || |||||||| ||||| ||| ||| | Sbjct 299 ATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACATAT 358 Query 9085 CGGGCGAAGACGGCGTAGTTTCGC--AGGCGCTGAAAGAGGTAGTTGAGGGTGGTGGCGG 9142 | | || || | || | | | | | ||| | |||||| || ||||| || Sbjct 359 CTCCCAAAA--GGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAGCAA 416 Query 9143 TGTGTTCTGCCACGAAGAAGTACATAACCCAGCGTCGCAACGTGGATTCGTTGATATCCC 9202 ||||||||||||| || ||| |||| ||||||||| | | || | ||| || || || | Sbjct 417 TGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGTCAC 476 Query 9203 CCAAGGCCTCAAGGCGCTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTGAAAAACTGGG 9262 | | ||||| | |||| || |||| || || | || || ||||| |||||||| Sbjct 477 CTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACTGCT 536 Query 9263 AGTTGCGCGCCGACACGGTTAACTCCTCCTC 9293 ||| | || ||||| || | ||| || || Sbjct 537 GGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100891909281000