Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000010.1 Length=35524 Score E Sequences producing significant alignments: (Bits) Value seq416950 428 9e-116 seq1393656 109 1e-19 >seq416950 Length=5269 Score = 428 bits (474), Expect = 9e-116 Identities = 1569/2423 (65%), Gaps = 84/2423 (3%) Strand=Plus/Plus Query 5056 TCCCAGAGCTCGGTAATGTGTTCTATGGCA-TCTCGATCCAGCAGACCTCCTCGTTTCGC 5114 ||||| || || | | ||||| | |||| | || ||||| || || || | ||||| Sbjct 340 TCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTCTT 398 Query 5115 GGGTTGGGACGGCTCCTGGAGTAGGGTATCAGACGATGGGCGTCCAGCGCTGCCAGGGTC 5174 ||||| || | || | ||||| || ||||| || ||| |||| | || | |||||| Sbjct 399 GGGTTTGGTTG-CTTTTCGAGTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGGTC 457 Query 5175 CGGTCTTTCCAGGGTCGCAGCGTCCGAGTCAGGGTTGTTTCCGTCACAGTGAAGGGGTGC 5234 ||||||||| || | || || || || | |||||||| || || ||||| ||| | Sbjct 458 TTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGGGCC 517 Query 5235 GCGCCTGGTTGGGCGCTT-GCGAGGGTGCGCTTCAGGCTCATCCTGCTGGTCGAGAACCG 5293 ||| || || || | | |||||||| || || | |||| | |||||| || || Sbjct 518 GCGT-TGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAAGCG 576 Query 5294 CTGCCGATCGGCGCCCTGCATGTCAGCCATGTAGCAGTTTACCATGAGT-TCGTAGTTGA 5352 ||| | || | | ||| ||||| || |||||| || ||| ||| || || | Sbjct 577 CTGGC--TCCCCTGC-TGCGCGTCAGACAAGTAGCATTTAGCCAA-AGTGTCATAACATA 632 Query 5353 GTGCCTCGGCTGCGTGACCTTTGGCGCGGAGCTTACCTTTGGAAGTTTTCTGGCAGGCAG 5412 | | | ||| ||||| || || || || |||||||| | | ||| || Sbjct 633 ATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAG-CA- 690 Query 5413 GGCAGTACAGACACT-----TGAGGGCATATAGCTTGGGCGCGAGGAAGATTGATTCGGG 5467 |||||| ||| | | | ||||| || || || ||||| |||| ||||| | Sbjct 691 ---AGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGA 747 Query 5468 GGAGTATGCATCCGCGCCGCAGGAGGCGCAGATGGTTTCGCATTCCACGAGCCAGGTCAG 5527 | ||||| | || | || || || ||||| || | ||| || | Sbjct 748 ACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAAT 807 Query 5528 ATCCGGCTCATCGGGGTCAAAAACAAGTTTACCGCCATGTTTTTTGATGCGCTTCTTACC 5587 | || | | || |||||||| || || || |||| ||| || ||||| | ||||| Sbjct 808 AGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACC 867 Query 5588 TTTGGTCTCCATGAGTTCGTGTCCCCGCTGGGTGACAAAGAGGCTGTCCGTGTCCCCGTA 5647 | | ||||||||| ||| ||| | ||| ||||| | |||||| ||||||||||| Sbjct 868 TCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTA 927 Query 5648 GACCGATTTTATGGGCCTGTCCTCGAGCGGAGTGCCTCGGTCCTCTTCGTAGAGGAACCC 5707 ||| |||||||| | | | | || || | |||| ||| || |||| | || | Sbjct 928 GACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTC 987 Query 5708 AGACCACTCTGATACAAAGGCGCGCGTCCAGGCCAGTACAAAAGAGGCCACGTGGGAGGG 5767 | |||||| || ||||| | | |||||||||| ||||| || || | |||||| | Sbjct 988 TGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGC 1047 Query 5768 GTAGCGGTCGTTATCAACCAGGGGGTCCACCTTCTCCACAGTATGTAAACACATGTCCCC 5827 ||| | || ||| || | | || || || | ||| ||||| || ||||| | Sbjct 1048 GTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATC 1107 Query 5828 CTCCTCCACATCCAAGAAGGTGATTGGCTTGTAAGTGTAGGCCACGTGACCAGTTCCAGC 5887 || || || || || ||||||||||| || | || | |||||||| | | Sbjct 1108 ATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCT----- 1162 Query 5888 CGGTGGGGTATAAAAGGGGGCGGGTCTCTGCTCGTCCTCACTGTCTTCCGGATCGCTGTC 5947 | |||||||||| ||| | ||| | | || ||||| || || ||| Sbjct 1163 ---TTGGGTATAAAAAGGGTGTGCTCTTCGTTT-TCATCACTTTCATCTAACTCGG---- 1214 Query 5948 CAGGAGCGCCAGCTGTTGGGGTAGGTATTCCCTTTCGAAGGCGGGCATAACCTCTGCACT 6007 ||| || ||| || |||| | | || | ||||||| || ||||| Sbjct 1215 CAGAAGGTGCAGGTG--------GGTAAGCTACGACAAATTCTGGCATAATTTCAGCACT 1266 Query 6008 CAGGTTGTCAGTTTCTAGGAACGAGGAGGATTTGATATTGACAGTGCCAGTTGAGATGCC 6067 | |||||||||||||| ||| || || |||||||| | | || | | |||| Sbjct 1267 AAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGT 1326 Query 6068 TTTCATGAGACTCTCG--TCCATTTGGTCAGAAAAGACAATTTTCTTGTTGTCAAGCTTG 6125 ||| ||| | || | || | |||||| ||||| |||||||| |||||||| | || Sbjct 1327 TTT--TGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTA 1384 Query 6126 GTGGCAAAGGATCCGTATAGGGCATTGGATAAAAGCTTGGCGATGGAGCGCATGGTTTGG 6185 ||||||||| || |||| ||| ||||| | ||||| || ||| |||||||||||| Sbjct 1385 GTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGG 1444 Query 6186 TTCTTATCCTTGTCCGCACGCTCCTTGGCAGCAATGTTGAGTTGGACGTACTCGCGCGCC 6245 ||||| || ||||| || || ||||| | ||||| || || ||||| || ||| Sbjct 1445 TTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCC 1504 Query 6246 AGGCACTTCCATTCAGGAAAGATGGTCGTCAGTTCATCTGGCACGATTCTGACTCGCCAG 6305 | ||||||||| || || |||||||| || ||| ||||| | || | ||| ||| Sbjct 1505 ACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCAT 1564 Query 6306 CCCCGATTATGCAGGGTGATTAGATCCACACTGGTGGCCACCTCGCCTCGGAGGGGCTCG 6365 || | || |||| || || | || | | || || || || ||||| | |||||| Sbjct 1565 CCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCG 1624 Query 6366 TTGGTCCAGCAGAGTCGACCCCCTTTTCTTGAACAGAAAggggggagggggTCTAGCATG 6425 || |||||||| || | || |||||||| || || || || || || || || | Sbjct 1625 TTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAAC 1684 Query 6426 AGTTCATCAGGGGGGTCTGCATCCATGGTGAATATTCCTGGGAGCAGATCTTTGTCAAAA 6485 | || || || || || || || |||||||| || ||||| || ||| | ||||||| Sbjct 1685 AACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAA 1744 Query 6486 TAGCTAA---TGTGAGCGGGGTCATCCAAAGCCATCTG--CCATTCTCGAGCTGCCAGCG 6540 ||| || | || | || || |||| |||| ||||||| || || | | Sbjct 1745 TAGTCAATTTTTTGCTCTAAGTTTTC--AAGCTTTCTGATCCATTCTGTCGCAGCTAAGG 1802 Query 6541 CGCGTTCATAGGGATTGAGTGGGGTGCCC-CATGGCATGGGGTGGGTGAGTGCAGAGGCA 6599 | | |||||| ||||| | || ||||| | || | || || || || ||| |||| Sbjct 1803 CTCTTTCATACGGATTTA-AAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCA 1861 Query 6600 TACATGCCACAGATGTCATAGACATACAGTGGTTCTTCGAGGATGCCGATGTAGGTGGGA 6659 |||||||| ||||||||||| ||||| | ||| | ||| | |||||| || || |||||| Sbjct 1862 TACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGA 1921 Query 6660 TAACAGCGCCCCCCTCTGATGCTTGCTCGCACATAGTCATAGAGTTCATGCGAGGGGGC- 6718 || ||||| || || | |||||| || || |||||||| | |||||| || || || Sbjct 1922 TAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCT 1981 Query 6719 GAGAAGACCCGGGCCCAGATTGGTACGGTTGGGTTTTTCAGCTCTGTAAACGATCTGGCG 6778 | || || | | || ||| | || || | | ||||||| | || || Sbjct 1982 AATAAAACGTTGTCTAAGTTTGCT-TTATTTGGCCTAACTTCTCTGTATAATATTTGCTT 2040 Query 6779 AAAGATGGCATGGGAATTGGAAGAGATGGTAGGTCTCTGAAAGATGTTAAAATGGGCATG 6838 ||| || ||||| || || || || || ||||| ||||| |||||||| |||| Sbjct 2041 AAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATC 2100 Query 6839 AGGCAGGCCCAC-AGAGTCCCTGACGAAGTGGGCATAGGACTCTTGCAGCTTGGCCACCA 6897 ||| | | ||| ||| | | |||| || || ||||| || ||| || | Sbjct 2101 AGGTAAGTTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTA 2159 Query 6898 GCTCGGCGGTGACGAGCACATCCAGGGCGCAGTAGTCAAGGGTCTCTTGAATGATGTCAT 6957 | | | || || | ||| || | | || |||| || || | || || ||||| | Sbjct 2160 GGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGT 2219 Query 6958 AA----CCTGGTTGGTTTTTCTTTTCCCACAGCTCGCGGTTGAGGAGGTATTCTTCGCGA 7013 || || ||| ||||||| | |||||| | |||||| | || ||||||| Sbjct 2220 AAGCCCCCACGTT--TTTTTCTCT--CCACAGAGCCTTGTTGAGTTGATACTCTTCGCTG 2275 Query 7014 TCTTTCCAGTACTCTTCGAGG---GGAAACCCGTCTTTGTCTGCACGGTAAGAGCCCAGC 7070 ||||||||| |||| ||| ||||| || || | ||| ||||||| || | Sbjct 2276 GATTTCCAGTA-TCTT--AGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATT 2332 Query 7071 ATGTAGAACTGATTGACTGCCTTGTAGGGGCAGCATCCCTTCTCCACGGGGAGAGAGTAT 7130 | ||||| | ||| ||||| | ||| || |||| ||| || || || || || ||| Sbjct 2333 CTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAA 2392 Query 7131 GCTTGGGCGGCCTTGCGCAGAGAGGTATGAGTGAGGGCAAAGGTGTCCCTGACCATGACT 7190 || || || || | | || || || || ||||| ||||| || ||||| | | Sbjct 2393 GCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAAT 2452 Query 7191 TTAAGGAACTGATACTTGAAGTC----GATGTCA--TTACAGGCCCCCTGTTCCCAGAGT 7244 |||| ||||| |||||| ||| | ||| | || | | | | ||||| Sbjct 2453 TTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTC---CACAC---TCCCAATCG 2506 Query 7245 TGGAAGTCTACCCGCTTCTTGTAGGCGGGATTGGGCAAAGCGAAAGTAACATCGTTGAAG 7304 ||| ||| || || | ||| ||||| || || |||| || || ||||| Sbjct 2507 GCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAAC 2566 Query 7305 AGTATCTTGCCTGCCCTGGGCATGAAATTGCGGGTGATGCGGAAAGGCTGGGGCACTTTT 7364 ||||| || || || ||||| ||||| | | || ||||| | | || | Sbjct 2567 AGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCC 2626 Query 7365 GCTCGGTTATTGATCACCTGAGCGGCTAGGACGATCTCATCAAAGCCATTGATGTTGTGC 7424 | || ||| | || || || ||||| | |||||||||||||| || ||||||||| Sbjct 2627 GTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGG 2686 Query 7425 CCCACTATGTACAGTTCTATGAA 7447 || | || || | ||| || || Sbjct 2687 CCAATTACATAAATTTCAATAAA 2709 Score = 114 bits (126), Expect = 3e-21 Identities = 392/608 (64%), Gaps = 16/608 (3%) Strand=Plus/Plus Query 8557 CCTGAGAAGACTTGCGTGCGCG-ACAACGCGGCGGTTGACGTCCTGGATCTGTCGCCTCT 8615 ||||| ||| | || ||| || | ||| | |||||||| || ||| |||| ||| Sbjct 3660 CCTGAAGAGAGTGGC-TGCTCGGATAACTCTGCGGTTGATGTTCTGAATCTCCCGCAGGC 3718 Query 8616 GGGTGAAAGCTACCGGCCCCGTGAGCTTGAACCTGAAAGAGAGTTCAACAGAATCAATCT 8675 || || | || || || || | ||||||||||||| | ||| | ||| ||||| | Sbjct 3719 CGGAAAATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGT 3778 Query 8676 CGGTATCGTTGACGGCGGCTTGTCTTAGGATCTCTTGTACGTCGCCCGAGTTGTCCTGGT 8735 | | || || || || |||| ||| ||||| ||||| || ||| || || | Sbjct 3779 CTGCGTCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGAT 3838 Query 8736 AGGCTATCTCGGCCATGAACTGCTCGATTTCTTCCTCCTGAAGATCTCCGCGGCCTGCTC 8795 | ||||| || ||||| |||||||| || ||||||| || | ||||| | ||||||| Sbjct 3839 AAGCTATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTC 3898 Query 8796 TCTCGACGGTGGCCGCGAGGTCGTTGGAGATGCGACCCATGAGTTGAGAGAATGCATTCA 8855 |||| || ||||| || | ||| || |||||| ||||| | | || || | Sbjct 3899 TCTCAACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTT 3958 Query 8856 TGCCTGCCTCGTTCCAGACGCGGCTGTAGACCACGGCCCCCTCGGGATCTCTCGCGCGCA 8915 || || ||||| || | |||||| || | || || | ||| || | || Sbjct 3959 CCCCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCA 4018 Query 8916 TGACCACCTGGGCGAGGTTGAGCTCCACGTGGC-------GGGTGAAGACCGCATAGTTG 8968 | || ||||| || || || ||| ||| | | || ||||| | || | Sbjct 4019 TTACTACCTGCGCCAGATTAAGCATCACATATCTCCCAAAAGGGGAAGATACCCTAAT-- 4076 Query 8969 CATAGGCGCTGGAAGAGGTAGTTGAGTGTGGTGGCGATGTGCTCGGTGACGAAGAAATAC 9028 | || | | || |||||| |||||||| || ||||| || | || || || || Sbjct 4077 --TTGGTGATTTAA---GTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAAC 4131 Query 9029 ATGATCCATCGTCTCAGCGGCATCTCGCTGACATCGCCCAGGGCTTCCAAGCGTTCCATG 9088 || | ||| ||| || | | || | | || || || || ||||| || | || Sbjct 4132 ATCACCCAGCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATA 4191 Query 9089 GCCTCGTAAAAGTCCACGGCAAAGTTGAAAAACTGGGAGTTGCGCGCGGACACGGTCAAC 9148 |||| ||||| | || |||||||| |||||||| ||| | || ||||| || | | Sbjct 4192 ACCTCATAAAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGC 4251 Query 9149 TCCTCCTC 9156 || || || Sbjct 4252 TCTTCTTC 4259 >seq1393656 Length=1543 Score = 109 bits (120), Expect = 1e-19 Identities = 337/521 (65%), Gaps = 14/521 (3%) Strand=Plus/Plus Query 8643 TGAACCTGAAAGAGAGTTCAACAGAATCAATCTCGGTATCGTTGACGGCGGCTTGTCTTA 8702 ||||||||||||| | ||| | ||| ||||| || | || || || || |||| ||| Sbjct 54 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 113 Query 8703 GGATCTCTTGTACGTCGCCCGAGTTGTCCTGGTAGGCTATCTCGGCCATGAACTGCTCGA 8762 ||||| ||||| || ||| || || || ||||| || ||||| |||||||| | Sbjct 114 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 173 Query 8763 TTTCTTCCTCCTGAAGATCTCCGCGGCCTGCTCTCTCGACGGTGGCCGCGAGGTCGTTGG 8822 | ||||||| || | ||||| | ||||||||||| || ||||| || | ||| || Sbjct 174 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 233 Query 8823 AGATGCGACCCATGAGTTGAGAGAATGCATTCATGCCTGCCTCGTTCCAGACGCGGCTGT 8882 |||||| ||||| | | || || | || || ||||| || | ||||| Sbjct 234 TAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCTGT 293 Query 8883 AGACCACGGCCCCCTCGGGATCTCTCGCGCGCATGACCACCTGGGCGAGGTTGAGCTCCA 8942 | || | || || | ||| || | ||| || ||||| || || || ||| || Sbjct 294 ACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCA 353 Query 8943 CGTGGC-------GGGTGAAGACCGCATAGTTGCATAGGCGCTGGAAGAGGTAGTTGAGT 8995 | | | || ||||| | || | | || | | || |||||| ||| Sbjct 354 CATATCTCCCAAAAGGGGAAGATACCCTAAT----TTGGTGATTTAA---GTAGTTTAGT 406 Query 8996 GTGGTGGCGATGTGCTCGGTGACGAAGAAATACATGATCCATCGTCTCAGCGGCATCTCG 9055 ||||| || ||||| || | || || || |||| | ||| ||| || | | || Sbjct 407 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 466 Query 9056 CTGACATCGCCCAGGGCTTCCAAGCGTTCCATGGCCTCGTAAAAGTCCACGGCAAAGTTG 9115 | | || || || || ||||| || | || |||| ||||| | || |||||||| Sbjct 467 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 526 Query 9116 AAAAACTGGGAGTTGCGCGCGGACACGGTCAACTCCTCCTC 9156 |||||||| ||| | || ||||| || | ||| || || Sbjct 527 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99728420410740