Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000017.1 Length=36001 Score E Sequences producing significant alignments: (Bits) Value seq416950 345 9e-91 seq1393656 163 6e-36 >seq416950 Length=5269 Score = 345 bits (382), Expect = 9e-91 Identities = 1584/2470 (64%), Gaps = 92/2470 (4%) Strand=Plus/Plus Query 5125 CGGTTTGAGGCCGTCCGCCGTAGGCAT-GCTTTTGAGCGTTTGACCAAGCAGTTCCAGGC 5183 |||||| || || || | |||||| |||||| ||| |||| | ||| ||| Sbjct 279 CGGTTTAAGCCCTTCAGAATAAGGCATAGCTTTTAAGCTTTTGTTGA-GCACAGACAGTT 337 Query 5184 GGTCCCACAGCTCGGTCACGTGCTCTACGGCA-TCTCGATCCAGCATATCTCCTCGTTTC 5242 |||||||| || | || || || |||||| | || ||||| |||| || | ||||| Sbjct 338 TATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTC 396 Query 5243 GCGGGTTGGGGCGGCTTTCGCTGTACGGCAGTAGTCGGTGCTCGTCCAGACGGGCCAGGG 5302 ||||| || | ||||| ||| |||| || ||||| |||| | | |||| Sbjct 397 TTGGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGG 455 Query 5303 TCATGTCTTTCCACGGGCGCAGGGTCCTCGTCAGCGTAGTCTGGGTCACGGTGAAGGGGT 5362 || |||||||||| || | || || | ||| | || || | ||| || ||||| ||| Sbjct 456 TCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGGG 515 Query 5363 GCGCTCCGGGCTGCGCGCTGGCCAGGGTGCGCTTGAGGCTGGTCCTGCTGGTGCTGAAGC 5422 ||| | || | || ||||| || || | || | ||||||| |||| Sbjct 516 CCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAAGC 575 Query 5423 GCTGCCGGTCTTCGCC--CTGCGCGTCGGCCAGGTAGCATTTGACCATGGTGTCATAGTC 5480 |||| | || || ||||||||| | || ||||||||| ||| |||||||| Sbjct 576 GCTGGC-----TCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAAAGTGTCATAACA 630 Query 5481 CAGCCCCTCCGCGGCATGGCCCTTGGCGCGCAGCTTGCCCTTGGAGGAGGCGCCGCACGA 5540 | | | ||||| ||||| || ||||| || || || | ||| ||| Sbjct 631 TAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCC-ACATGCC-CACA- 687 Query 5541 GGGGCAGTGCAGAC-----TTTTGAGGGCGTAGAGCTTGGGCGCGAGAAATACCGATTCC 5595 | ||| || || |||| | || || || || || |||||||| || ||||| Sbjct 688 --GCAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCA 745 Query 5596 GGGGAGTAGGCATCCGCGCCGCAGGCCCCGCAGACGGTCTCGCATTCCACGAGCCAGGTG 5655 | | ||||| | || | || ||||| ||||| || | ||| || Sbjct 746 GAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTA 805 Query 5656 AGCTCTGGCCGTTCGGGGTCAAAAACCAGGTTTCCCCCATGCTTTTTGATGCGTTTCTTA 5715 | ||| || || |||||||| || || || |||| || || ||||| | ||| Sbjct 806 ATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTA 865 Query 5716 CCTCTGGTTTCCATGAGCCGGTGTCCACGCTCGGTGACGAAAAGGCTGTCCGTGTCCCCG 5775 ||||| |||||||||||||| || ||||| || || | |||||| ||||||||| Sbjct 866 CCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCG 925 Query 5776 TATACAGACTTGAGAGGCCTGTCCTCGAGCGGTGTTCCGCGGTCCTCCTCGTATAGAAAC 5835 || ||||| || | || | | | || || |||| | ||| || |||||| ||| Sbjct 926 TAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAAT 985 Query 5836 TCGGACCACTCTGAGACGAAGGCTCGCGTCCAGGCCAGCACGAAGGAGGCTAAGTGGGAG 5895 || | |||||| || || || ||| |||||||||| || || || || | |||||| Sbjct 986 TCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAA 1045 Query 5896 GGGTAGCGGTCGTTGTCCACTAGGGGGTCCACTCGCT--CCAGGGTGTGAAGACACATGT 5953 | ||| | || ||| || | || || | | | | | | ||||| | || |||| Sbjct 1046 GCGTACCTGTTGTTTTCTATTAAAGGAG--AGTTGTTTTCTAAAGTGTGTAAGCATATGT 1103 Query 5954 CCCCCTCTTCGGCATCAAGGAAGGTGATTGGTTTATAGGTGTATGCCACGTGACCGGGTG 6013 | | ||||| | || | || |||||||| ||||| | |||| |||||||| | Sbjct 1104 CATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTT 1163 Query 6014 TTCCTGAAgggggggtataaaagggggtgggggCGCGTTCGTCCTCACTCTCTTCCGCAT 6073 | |||||||||| ||| | || | ||||| ||| || ||| | || Sbjct 1164 T-----------GGGTATAAAAAGGGT---GTGCTC-TTCGTTTTCA-TCACTTTC--AT 1205 Query 6074 CGCTGTCTGC-GAGGGCCAGCTGTTGGGGTGAGTACTCCCTCTGGAAAGCGGGCATGACT 6132 | || || || || || | |||| | || || | | || | ||||| | | Sbjct 1206 CTAACTCGGCAGAAGGT--GCAGGTGGG-TAAG--CTACGACA--AATTCTGGCATAATT 1258 Query 6133 TCTGCGCTAAGGTTGTCAGTTTCCAAAAACGAGGAGGATTTGATATTCACCTGGCCCGCG 6192 || || |||| |||||||||||| | || || || |||||||| | | || | Sbjct 1259 TCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTG 1318 Query 6193 GTGATGCCTTTGAGGGTGGCCGCGTCCATCTGGTCAGAAAAGACAATCTTTTTGTTGTCA 6252 | |||| ||| | | || || | ||||| ||||| ||||| ||||||||||| Sbjct 1319 GCGATGGTTTTTGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCC 1378 Query 6253 AGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGG 6312 | || |||||||| || || | ||||||||| || | ||| || ||| |||| | Sbjct 1379 AATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATG 1438 Query 6313 GTTTGGTTTTTGTCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 6372 |||||||| || || || || || ||||| |||||||||||||||||||||| Sbjct 1439 GTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCT 1498 Query 6373 CGCGCAACGCACCGCCATTCGGGAAAGACGGTGGTGCGCTCGTCGGGCACCAGGTGCACG 6432 || |||||| ||| || || |||| ||| || | ||||| || | | | |||| Sbjct 1499 TTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACT 1558 Query 6433 CGCCAACCGCGGTTGTGCAGGGTGACAAGGTCAACGCTGGTGGCTACCTCTCCGCGTAGG 6492 ||| || | |||||||| || | | ||| | || ||||| ||||| || | Sbjct 1559 GCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAA 1618 Query 6493 CGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCGGTAGGGGGTCT 6552 ||||||| |||||||| || | ||||| || | ||||| || || || || || Sbjct 1619 GGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCA 1678 Query 6553 AGCTGCGTCTCGTCCGGGGGGTCCGCGTCCACGGTAAAGATCCCGGGCAACAGGCGCGCG 6612 || | |||||| || || |||||||| | ||| || || || || | || | | || Sbjct 1679 AGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCG 1738 Query 6613 TCGAAGTAGTCTATCTTGCATCCTTGC---AAG-TCTAACGCCTGCTG--CCATGCGCGG 6666 || || ||||| || || |||| ||| | | | || | ||| |||| | Sbjct 1739 TCAAAATAGTCAATTTT------TTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTC 1792 Query 6667 GCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGAGC 6726 || || | || | || || || || | || | || | || | || || || || Sbjct 1793 GCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGA 1852 Query 6727 GCGGAGGCGTACATGCCGCAGATGTCGTAAACGTAGAGGGGC---TCCCTGAGTATTCCA 6783 || ||| ||||||||||||||||| || || || | ||| ||| || || ||| Sbjct 1853 GCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATG---ATGCCA 1909 Query 6784 AGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCGCGCACGTAATCGTATAGTTCG 6843 | ||| || || ||||| | ||||| |||||||| ||| ||||| || || | ||| Sbjct 1910 ATATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCA 1969 Query 6844 TGCGAGGGGGCGAGGAGTTCG-GGACCGAGGTTGCTACGGGCGGGCTGCTCTGCTCGGAA 6902 || || || || | | || | | || ||||| || || || ||| | | Sbjct 1970 TGAGATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCT-AACTTCTCTGTA 2028 Query 6903 GACGATCTGCCTGAAGATGGCATGCGAGTTCGATGATATGGTTGGACGCTGGAAGACGTT 6962 | || ||| | || || ||||| ||||| || || || || | || || | ||| Sbjct 2029 TAATATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTT 2088 Query 6963 GAAGCTGGCGTC-TGTAAGACCTACCGCATCACGCACGAAGGAGGCGTAGGAGTCGCGCA 7021 || || || ||||| | || | | | ||| ||| || || | | Sbjct 2089 AAATGAAGCATCAGGTAAGTTC-ACTTGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGA 2147 Query 7022 GCTTGTTGACCAGCTCGGCGGTGACCTGCACGTCTAGGGCACAGTAGTCCAGGGTTTCCT 7081 | ||||| || || | | || || ||||||| | |||| |||| ||| |||| || Sbjct 2148 GTTTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCT 2207 Query 7082 TGATGATGTCATACTTATCCTGTCCCttttttt---tCCACAGCTCGCGGTTGAGGACAA 7138 ||| ||||| || | || | ||||||| ||||||| | |||||| | Sbjct 2208 GGATTATGTCGTA---AGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGAT 2264 Query 7139 ACTCTTCGCGGTCTTTCCAGTACTCTT-GGATCGGAAACCCGTCGGCCTCCGAACGGTAA 7197 ||||||||| | ||||||||| |||| || | ||||| || || | || ||||| Sbjct 2265 ACTCTTCGCTGGATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAA 2323 Query 7198 GAGCCTAGCATGTAGAACTGGTTGACGGCCTGGTAGGCGCAGCATCCCTTTTCTACGGGT 7257 || |||| | ||||| | || || || | ||| | |||| ||| |||||||| || Sbjct 2324 GACCCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGC 2383 Query 7258 AGCGCGTATGCCTGCGCGGC-CTTCCGGAGCGAGGTGTGGGTGAGCGCAAAGGTGTCCCT 7316 ||| |||| ||| || || ||| ||| | |||||||| |||||||| ||||| || Sbjct 2384 AGCTCGTAAGCCCCAGCAGCATTTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCT 2442 Query 7317 GACCATGACTTTGAGGTACTGGTATTTGAAGTCAGTGTC-GT-CGCATCCGCCCTGCTCC 7374 ||||| | ||| | ||||||| ||| ||| | | | || || | || |||| Sbjct 2443 TACCATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTT--TCCACACTCC 2500 Query 7375 CA--GAGCAAAAAGTCCGTGCGCTTTTTGGAACGCGGGTTTGGTAGGGCGAAGGTGACAT 7432 || || ||| || | || |||| | | || || |||| | || | | | Sbjct 2501 CAATCGGCGAAA--TCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGT 2558 Query 7433 CGTTGAAGAGTATCTTTCCCGCGCGAGGCATAAAATTGCGTGTGATGCGGAAGGGTCCCG 7492 | ||||| ||||| || || | ||||||||||| | | || ||| | | Sbjct 2559 CATTGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCA 2618 Query 7493 GCACCTCGGAACGGTTGTTAATTACCTGGGCGGCGAGCACGATCTCGTCAAAGCCGTTGA 7552 | || || | | ||||| || || || ||||| | ||||||||| ||||| ||| || Sbjct 2619 GAACATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGA 2678 Query 7553 TGTTGTGGCC 7562 |||||||||| Sbjct 2679 TGTTGTGGCC 2688 Score = 168 bits (186), Expect = 1e-37 Identities = 385/574 (67%), Gaps = 8/574 (1%) Strand=Plus/Plus Query 8735 GCGGTTGATCTCCTGAATCTGGCGCCTCTGCGTGAAGACGACGGGCCCGGTGAGCTTGAA 8794 ||||||||| | |||||||| ||| | || || || || ||||| | |||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8795 CCTGAAAGAGAGTTCGACAGAATCAATTTCGGTGTCGTTGACGGCGGCCTGGCGCAAAAT 8854 ||||||||| | ||| | ||| ||||| || | ||| || || || | || ||||| Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8855 CTCCTGCACGTCTCCTGAGTTGTCTTGATAGGCGATCTCGGCCATGAACTGCTCGATCTC 8914 ||| ||||||||| ||| || ||||| || || || ||||| |||||||| ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8915 TTCCTCCTGGAGATCTCCGCGTCCGGCTCGCTCCACGGTGGCGGCGAGGTCGTTGGAGAT 8974 ||||| || | ||||| | || |||| ||| || ||||| || | ||| || || Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8975 GCGGGCCATGA-GCTGCGAGAAGGC-GTTGAGGCCTCCCTCGTTCCAGACGCGGCTGTAG 9032 ||| | ||||| | | | | ||| | ||| || || ||||| || | |||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGCTGTAC 3987 Query 9033 ACCACGCCCCCTTCGGCATCGCGGGCGCGCATGACCACCTGCGCGAGATTGAGCTCCACG 9092 || | || || | | | ||| | ||| || |||||||| ||||| ||| ||| Sbjct 3988 ACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACA 4047 Query 9093 TGCCGGGCGAAGACGGCGTAGTTTCGC--AGGCGCTGAAAGAGGTAGTTGAGGGTGGTGG 9150 | | | | | || | || | | | | | ||| | |||||| || ||||| | Sbjct 4048 TATC--TCCCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAG 4105 Query 9151 CGGTGTGTTCTGCCACGAAGAAGTACATAACCCAGCGTCGCAACGTGGATTCGTTGATAT 9210 | ||||||||||||| || ||| |||| ||||||||| | | || | ||| || || | Sbjct 4106 CAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGT 4165 Query 9211 CCCCCAAGGCCTCAAGGCGCTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTGAAAAACT 9270 | || | ||||| | |||| || |||| || || | || || ||||| ||||||| Sbjct 4166 CACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACT 4225 Query 9271 GGGAGTTGCGCGCCGACACGGTTAACTCCTCCTC 9304 | ||| | || ||||| || | ||| || || Sbjct 4226 GCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 163 bits (180), Expect = 6e-36 Identities = 382/571 (67%), Gaps = 8/571 (1%) Strand=Plus/Plus Query 8738 GTTGATCTCCTGAATCTGGCGCCTCTGCGTGAAGACGACGGGCCCGGTGAGCTTGAACCT 8797 |||||| | |||||||| ||| | || || || || ||||| | ||||||| Sbjct 1 GTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAACCT 60 Query 8798 GAAAGAGAGTTCGACAGAATCAATTTCGGTGTCGTTGACGGCGGCCTGGCGCAAAATCTC 8857 |||||| | ||| | ||| ||||| || | ||| || || || | || |||||||| Sbjct 61 GAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAATCTC 120 Query 8858 CTGCACGTCTCCTGAGTTGTCTTGATAGGCGATCTCGGCCATGAACTGCTCGATCTCTTC 8917 ||||||||| ||| || ||||| || || || ||||| |||||||| |||||||| Sbjct 121 ACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTCTTC 180 Query 8918 CTCCTGGAGATCTCCGCGTCCGGCTCGCTCCACGGTGGCGGCGAGGTCGTTGGAGATGCG 8977 || || | ||||| | || |||| ||| || ||||| || | ||| || ||||| Sbjct 181 CTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAATGCG 240 Query 8978 GGCCATGA-GCTGCGAGAAGGC-GTTGAGGCCTCCCTCGTTCCAGACGCGGCTGTAGACC 9035 | ||||| | | | | ||| | ||| || || ||||| || | |||||| || Sbjct 241 AGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGCTGTACACA 298 Query 9036 ACGCCCCCTTCGGCATCGCGGGCGCGCATGACCACCTGCGCGAGATTGAGCTCCACGTGC 9095 | || || | | | ||| | ||| || |||||||| ||||| ||| ||| | Sbjct 299 ATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACATAT 358 Query 9096 CGGGCGAAGACGGCGTAGTTTCGC--AGGCGCTGAAAGAGGTAGTTGAGGGTGGTGGCGG 9153 | | | | || | || | | | | | ||| | |||||| || ||||| || Sbjct 359 C--TCCCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAGCAA 416 Query 9154 TGTGTTCTGCCACGAAGAAGTACATAACCCAGCGTCGCAACGTGGATTCGTTGATATCCC 9213 ||||||||||||| || ||| |||| ||||||||| | | || | ||| || || || | Sbjct 417 TGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGTCAC 476 Query 9214 CCAAGGCCTCAAGGCGCTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTGAAAAACTGGG 9273 | | ||||| | |||| || |||| || || | || || ||||| |||||||| Sbjct 477 CTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACTGCT 536 Query 9274 AGTTGCGCGCCGACACGGTTAACTCCTCCTC 9304 ||| | || ||||| || | ||| || || Sbjct 537 GGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101068961935170