Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000018.1 Length=35514 Score E Sequences producing significant alignments: (Bits) Value seq416950 426 3e-115 seq1393656 96.9 7e-16 >seq416950 Length=5269 Score = 426 bits (472), Expect = 3e-115 Identities = 1251/1905 (66%), Gaps = 53/1905 (3%) Strand=Plus/Plus Query 5516 GGGTCAAAAACAAGTTTTCCGCCATGTTTTTTGATGCGTTTCTTACCTTTGGTTTCCATG 5575 || |||||||| || || || |||| ||| || ||||| | |||||| | |||||| Sbjct 821 GGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATG 880 Query 5576 AGGTCGTGTCCCCGCTGGGTGACAAAGAGGCTGTCCGTGTCCCCGTAGACCGACTTTATG 5635 || ||| ||| | ||| ||||| | |||||| |||||||||||||| || ||||| Sbjct 881 AGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATA 940 Query 5636 GGCCTGTCCTCGAGCGGAGTGCCTCGGTCCTCTTCGTAGAGGAACCCAGCCCACTCTGAT 5695 | | | | || || | |||| ||| || |||| | || | |||||||| || Sbjct 941 GTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGAC 1000 Query 5696 ACAAAAGCGCGTGTCCAGGCCAGCACAAAGGAGGCCACGTGGGAGGGGTAGCGGTCGTTG 5755 ||||| | | |||||||||| ||||| || || | |||||| | ||| | || ||| Sbjct 1001 ACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTT 1060 Query 5756 TCAACCAGGGGGTCCACCTTCTCTACGGTATGTAAACACATGTCCCCCTCCTCCACATCC 5815 || | | || || |||| || ||||| || ||||| | || || || Sbjct 1061 TCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCT 1120 Query 5816 AAGAATGTGATTGGCTTGTAAGTGTAGGCCACGTGACCAGGGGTCCCCGCCgggggggTA 5875 || || ||||||||||| || | || | |||||||| | | ||||| Sbjct 1121 AAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTT-----------GGGTA 1169 Query 5876 TAAAAGGGGGCGGGCCTCTGTTCGTCCTCACTGTCTTCCGGATCGCTGTCCAGGAGCGCC 5935 ||||| ||| | || ||| || ||||| || || ||| ||| || | Sbjct 1170 TAAAAAGGGTGTGCTCTTCGTTT-TCATCACTTTCATCTAACTCGG----CAGAAGGTGC 1224 Query 5936 AGCTGTTGGGGTAGGTATTCCCTCTCGAAGGCGGGCATGACCTCTGCACTCAGGTTGTCA 5995 || || |||| | | || | ||||| | || ||||| | ||||||| Sbjct 1225 AGGTG--------GGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTAAAGTTGTCA 1276 Query 5996 GTTTCTAGGAACGAGGAGGATTTGATATTGACAGTACCAGCAGAGATGCCTTTCATAAGA 6055 ||||||| ||| || || |||||||| | |||| | |||| ||| | | Sbjct 1277 GTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTTTT--TGACG 1334 Query 6056 CTCTCG--TCCATCTGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGGTAGCAAATG 6113 | || | || | ||||| ||||||||||| || |||||||||| || || ||||| Sbjct 1335 CGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTGGCAAAGC 1394 Query 6114 ATCCATAGAGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTTTCCT 6173 ||||| | ||| ||||| || ||||| || ||| |||||||||||||||||||| | Sbjct 1395 TGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTT 1454 Query 6174 TGTCCGCGCGCTCCTTGGCGGCGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCC 6233 |||| || || ||||| ||||||| ||||| ||||| || ||||| || |||| Sbjct 1455 TGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGCACTTCC 1514 Query 6234 ATTCAGGGAAGATGGTTGTCAGTTCATCCGGAACTATTCTGACTCGCCATCCCCTATTGT 6293 | || |||||||||||||| ||| || |||| || | ||| |||||| || |||| Sbjct 1515 ACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCTCTGTTGT 1574 Query 6294 GCAGGGTTATCAGATCCACACTGGTGGCCACCTCGCCTCGGAGGGGCTCATTGGTCCAGC 6353 ||| || |||| || | | || || || || ||||| | ||||| || ||||||| Sbjct 1575 GCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTAGTCCAGC 1634 Query 6354 AGAGTCGACCTCCTTTTCTTGAACAGAAAggggggagggggTCTAGCATGAGCTCATCAG 6413 | || | || |||||||| || || || || || || || || | | ||| || | Sbjct 1635 ACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAACTCGTCTG 1694 Query 6414 GGGGGTCCGCATCTATGGTAAATATTCCCGGTAGCAAATCTTTGTCAAAATAGCTGA--T 6471 | || ||||| || ||||| || || || || || | | | |||||||||| | | Sbjct 1695 GAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAATAGTCAATTT 1754 Query 6472 GGTGGTGGGATCATCCAAGGTCATCTG--CCATTCTCGAACTGCCAGCGCGCGCTCATAG 6529 || | | | |||| | |||| ||||||| | || | || | ||||| Sbjct 1755 TTTGCTCTAAGTTTTCAAGCT-TTCTGATCCATTCTGTCGCAGCTAAGGCTCTTTCATAC 1813 Query 6530 GGGTTAAGAGGGGTGCCC-CAGGGCATGGGGTGGGTGAGCGCGGAGGCATACATGCCACA 6588 || || | | || ||||| | ||| | || || || || || |||||||||||| || Sbjct 1814 GGATTTA-AAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCATACATGCCGCA 1872 Query 6589 GATATCGTATACATAGAGGGGCTCTTCGAGGATGCCGATGTAAGTGGGATAACAGCGCCC 6648 ||| || || ||||| | |||| ||| | |||||| || ||||||||||| ||||| || Sbjct 1873 GATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGATAGCAGCGACC 1932 Query 6649 CCCTCTGATGCTTGCTCGCACATAGTCATAGAGTTCATGTGAGGGGGC-GAGAAGACCCG 6707 || | |||||| || || |||||||| | |||||| || || || | || || Sbjct 1933 ACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCTAATAAAACGTT 1992 Query 6708 GGCCCAGATTGGTGCGGTTGGGTTTTTCCGCCCTGTAAACGATCTGGCGAAAGATGGCAT 6767 | | || ||| | || || | | | ||||| | || || ||| || |||| Sbjct 1993 GTCTAAGTTTGCT-TTATTTGGCCTAACTTCTCTGTATAATATTTGCTTAAAAATTGCAT 2051 Query 6768 GGGAATTTGAAGAGATAGTAGGTCTCTGGAATATGTTAAAATGGGCATGAGGTAGGCCTA 6827 | || || || ||||| ||||| || || |||||||| |||| ||||| | | Sbjct 2052 GAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATCAGGTAAGTTCA 2111 Query 6828 C-AGAGTCCCTTATGAAGTGGGCATATGACTCTTGCAGCTTGGCTACCAGCTCGGCGGTG 6886 | ||| | || |||| || || ||||| || ||| ||| || | | || Sbjct 2112 CTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTAGGGCCGATGTC 2170 Query 6887 ACGAGTACATCCAGGGCACAGTAGTCGAGAGTTTCCTGGATGATGTCATAACGCGGTTGG 6946 || | || || | |||| |||| || |||| |||||| ||||| ||| | | Sbjct 2171 ACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGTAAGCCCCCACG 2230 Query 6947 CTTTTCTTTTCCCACAGCTCGCGGTTGAGAAGGTATTCTTCGC--GATCCTTCCAGTACT 7004 |||| | | |||||| | |||||| | || ||||||| ||| |||||||| | Sbjct 2231 TTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGGAT--TTCCAGTA-T 2287 Query 7005 CTTCGAGG---GGAAACCCGTCTTTTTCTGCACGGTAAGAGCCCAACATGTAGAACTGAT 7061 ||| ||| ||||| || || | ||| ||||||| || | | ||||| | || Sbjct 2288 CTT--AGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTATAGAATTCAT 2345 Query 7062 TGACTGCCTTGTAGGGACAGCATCCCTTCTCCACTGGGAGAGAGTATGCTTGGGCTGCAT 7121 | ||||| | ||| ||||||| ||| || || || || || ||| || || |||| Sbjct 2346 TTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCCCCAGCAGCAT 2405 Query 7122 TGC-GCAGCGAGGTATGAGTGAGGGCAAAAGTGTCCCTGACCATGACTTTGAGGAATTGA 7180 | | ||| | || || || || ||||||||||| || ||||| | ||| | || || Sbjct 2406 TTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAATTTAACAAACTGG 2464 Query 7181 TACTTGAAGTCCATGTCATCACAG-GCCCCCTGTTCCCAGAGTTGGAAGTCCACCCGCTT 7239 |||||| |||| | | | || || ||||| ||| || || || Sbjct 2465 TACTTGTGGTCCGCGGC-TGTGAGCTTTCCACACTCCCAATCGGCGAAATCTTTTCGTTT 2523 Query 7240 CTTGTAGGCGGGGTTGGGCAAAGCGAAAGTAACATCATTGAAGAGGATCTTGCCGGCCCT 7299 | ||| || || || || |||| || |||||||| || || || ||| || Sbjct 2524 TTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAACAGTATTTTACCGTTTCT 2583 Query 7300 GGGCATGAAATTTCGGGTGATTCTGAAAGGCTGAGGGACCTCTGCTCGGTTATTGATAAC 7359 ||||| ||||||| | ||| |||||| | | || || | || ||| | || || Sbjct 2584 TGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCCGTTCTGTTGTGTATGAC 2643 Query 7360 CTGAGCGGCCAAGACGATCTCATCAAAGCCATTGATGTTGTGCCC 7404 || |||||||| |||||||||||||| || ||||||||| || Sbjct 2644 TTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCC 2688 Score = 96.9 bits (106), Expect = 7e-16 Identities = 334/521 (64%), Gaps = 14/521 (3%) Strand=Plus/Plus Query 8621 TGAACCTGAAAGAGAGTTCAACAGAATCAATCTCGGTATCGTTGACGGCGGCTTGCCTAA 8680 ||||||||||||| | ||| | ||| ||||| || | || || || || ||||| | | Sbjct 3746 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 3805 Query 8681 GGATTTCTTGCACGTCGCCAGAGTTATCCTGGTAGGCGATCTCGGCCATGAACTGCTGGA 8740 || || |||||| || |||||| || || || || || ||||| ||||||| | Sbjct 3806 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 3865 Query 8741 TCTCTTCCTCTTGAAGATCTCCGCGGCCCGCTCTCTCGACGGTGGCCGCTAGGTCGTTGG 8800 ||||||||| | | ||||| | || |||||||| || ||||| || | ||| || Sbjct 3866 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 3925 Query 8801 AGATGCGCCCAATGAGTTGAGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTGT 8860 ||||| |||| | | || || | || || ||||| || | ||||| Sbjct 3926 TAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCTGT 3985 Query 8861 AGACCACAGCCCCCACGGGATCTCTCGCGCGCATAACCACCTGGGCGAGGTTAAGCTCTA 8920 | || | || | | ||| || | ||| || ||||| || || |||||| | Sbjct 3986 ACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCA 4045 Query 8921 CGTGGC-------GGGTGAAGACCGCATAGTTGCATAGGCGCTGGAAAAGGTAGTTGAGT 8973 | | | || ||||| | || | | || | | || |||||| ||| Sbjct 4046 CATATCTCCCAAAAGGGGAAGATACCCTAAT----TTGGTGATTTAA---GTAGTTTAGT 4098 Query 8974 GTGGTGGCGATGTGCTCGGTGACGAAGAAATACATGATCCATCGTCTCAGCGGCATCTCG 9033 ||||| || ||||| || | || || || |||| | ||| ||| || | | || Sbjct 4099 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 4158 Query 9034 CTGACATCGCCCAGCGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAGTTG 9093 | | || || ||||| ||||| |||| || |||| || || | || |||||||| Sbjct 4159 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 4218 Query 9094 AAAAACTGGGAGTTACGCGCGGACACGGTCAACTCCTCTTC 9134 |||||||| ||| | || ||||| || | ||| ||||| Sbjct 4219 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 96.9 bits (106), Expect = 7e-16 Identities = 334/521 (64%), Gaps = 14/521 (3%) Strand=Plus/Plus Query 8621 TGAACCTGAAAGAGAGTTCAACAGAATCAATCTCGGTATCGTTGACGGCGGCTTGCCTAA 8680 ||||||||||||| | ||| | ||| ||||| || | || || || || ||||| | | Sbjct 54 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 113 Query 8681 GGATTTCTTGCACGTCGCCAGAGTTATCCTGGTAGGCGATCTCGGCCATGAACTGCTGGA 8740 || || |||||| || |||||| || || || || || ||||| ||||||| | Sbjct 114 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 173 Query 8741 TCTCTTCCTCTTGAAGATCTCCGCGGCCCGCTCTCTCGACGGTGGCCGCTAGGTCGTTGG 8800 ||||||||| | | ||||| | || |||||||| || ||||| || | ||| || Sbjct 174 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 233 Query 8801 AGATGCGCCCAATGAGTTGAGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTGT 8860 ||||| |||| | | || || | || || ||||| || | ||||| Sbjct 234 TAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCTGT 293 Query 8861 AGACCACAGCCCCCACGGGATCTCTCGCGCGCATAACCACCTGGGCGAGGTTAAGCTCTA 8920 | || | || | | ||| || | ||| || ||||| || || |||||| | Sbjct 294 ACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCA 353 Query 8921 CGTGGC-------GGGTGAAGACCGCATAGTTGCATAGGCGCTGGAAAAGGTAGTTGAGT 8973 | | | || ||||| | || | | || | | || |||||| ||| Sbjct 354 CATATCTCCCAAAAGGGGAAGATACCCTAAT----TTGGTGATTTAA---GTAGTTTAGT 406 Query 8974 GTGGTGGCGATGTGCTCGGTGACGAAGAAATACATGATCCATCGTCTCAGCGGCATCTCG 9033 ||||| || ||||| || | || || || |||| | ||| ||| || | | || Sbjct 407 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 466 Query 9034 CTGACATCGCCCAGCGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAGTTG 9093 | | || || ||||| ||||| |||| || |||| || || | || |||||||| Sbjct 467 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 526 Query 9094 AAAAACTGGGAGTTACGCGCGGACACGGTCAACTCCTCTTC 9134 |||||||| ||| | || ||||| || | ||| ||||| Sbjct 527 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99700316814840