Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AC_000019.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq416950 554 9e-154 seq1393656 134 3e-27 >seq416950 Length=5269 Score = 554 bits (614), Expect = 9e-154 Identities = 1593/2410 (66%), Gaps = 85/2410 (4%) Strand=Plus/Plus Query 5041 AGTCTGTTCCACAGTTCAGTGATGTGTTCTATGGCA-TCTCGATCCAGCAGACCTCCTCG 5099 ||| | | ||||||||| | | ||||| | |||| | || ||||| || || || | | Sbjct 334 AGTTTATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTG 392 Query 5100 TTTCGCGGGTTTGGACGGCTCCTGGAGTAGGGTATGAGACGATGGGCGTCCAGCGCTGCC 5159 |||| |||||||| | || | ||||| || || || || ||| |||| | || | Sbjct 393 TTTCTTGGGTTTGGTTG-CTTTTCGAGTAAGGCATCAGGCGGTGGCCGTCTATGTCTACA 451 Query 5160 AGGGTTCGGTCCTTCCAGGGTCTCAGTGTTCGAGTCAGGGTTGTTTCCGTCACAGTGAAG 5219 ||||| ||| ||||| || |||| ||| || || | |||||||| || || ||||| Sbjct 452 AGGGTCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAAC 511 Query 5220 GGGTGTGCGCCTGCTTGGGCGCTT-GCCAGGGTGCGCTTCAGACTCATTCTGCTGGTGGA 5278 ||| ||| ||||| || | | || ||||| || || | ||||| | ||||||| Sbjct 512 GGGGCCGCGT-TGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTG 570 Query 5279 GAACTTCTGTCGCTTGGCGCC--CTGTATGTCGGCCAAGTAGCAGTTTACCATGAGT-TC 5335 || ||| ||| | || ||| ||| | ||||||||| || ||| ||| || Sbjct 571 AAAGCGCTG--GCT---CCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAA-AGTGTC 624 Query 5336 GTAGTTGAGCGCCTCGGCTGCGTGGCCTTTGGCGCGGAGCTTACCTTTGGAAGTTTTCTT 5395 || | | | ||| || || || || || || |||||||| | | Sbjct 625 ATAACATAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCA----CAT 680 Query 5396 GCATACCGGGCAGTATAGGCA-----TTTCAGCGCATACAGCTTGGGCGCAAGGAAAATG 5450 || || | |||| | || ||| | |||||||| || || || || || | Sbjct 681 GCCCACAGCA-AGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACA 739 Query 5451 GATTCTGGGGAGTATGCATCCGCGCCGCAGGAGGCGCAAACAGTTTCACATTCCACCAGC 5510 ||||| | | ||||| | || | || ||| |||||||| |||| | Sbjct 740 GATTCAGAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAAC 799 Query 5511 CAGGTTAAATCCGGTTCATTGGGGTCAAAAACAAGTTTTCCGCCATATTTTTTGATGCGT 5570 || || | | || | || || |||||||| || || || |||| ||| || ||||| Sbjct 800 CATGTAATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGG 859 Query 5571 TTCTTACCTTTGGTCTCCATAAGTTCGTGTCCTCGTTGAGTGACAAACAGGCTGTCCGTA 5630 | |||||| | |||||| || ||| || || || ||||||| |||||| || Sbjct 860 TGTTTACCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTG 919 Query 5631 TCTCCGTAGACTGATTTTACAGGCCTCTTCTCCAGTGGAGTGCCTCGGTCTTCTTCGTAC 5690 || |||||||| ||||||| || | | | ||||| | |||| |||||| |||| Sbjct 920 TCCCCGTAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTAT 979 Query 5691 AGGAACTCTGACCACTCTGATACAAAGGCGCGCGTCCAGGCCAGCACAAAGGAGGCTATG 5750 | || |||| |||||| || ||||| | | |||||||||| ||||| || || ||| Sbjct 980 AAAAATTCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATG 1039 Query 5751 TGGGAGGGGTAGCGATCGTTGTCAACCAGGGGGTCCACCTTTTCCAAAGTATGCAAACAC 5810 ||||| | ||| | | ||| || | | || ||||| ||||| || || || Sbjct 1040 TGGGAAGCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCAT 1099 Query 5811 ATGTCACCCTCTTCAACATCCAGGAATGTGATTGGCTTGTAGGTGTATTTCACGTGACCT 5870 |||||| | |||||| || | || ||||||||||| || | ||| ||||||||| Sbjct 1100 ATGTCATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTA 1159 Query 5871 GGGGTCCCCGCTgggggggTATAAAAGGGGGCGGTTCTTTGCTCTTCCTCACTGTCTTCC 5930 | |||||||||| ||| | |||| | | ||| ||||| || || Sbjct 1160 TCTTT-----------GGGTATAAAAAGGGTGTGCTCTTCGTT-TTCATCACTTTCATCT 1207 Query 5931 GGATCGCTGTCCAGGAACGTCAGCTGTTGGGGTAGGTATTCCCTCTCGAAGGCGGGCATG 5990 ||| ||| || || || | |||| || || | || | ||||| Sbjct 1208 AACTCGG----CAG-AAGGT--GCAGGTGGGTAAGCTACGACA-----AATTCTGGCATA 1255 Query 5991 ACCTCTGCACTCAGGTTGTCAGTTTCTAAGAACGAGGAGGATTTGATATTGACAGTGCCG 6050 | || ||||| | |||||||||||||| ||| || || |||||||| | | || Sbjct 1256 ATTTCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCT 1315 Query 6051 GTTGAGATGCCTTTCATGAGGTTTTCG--TCCATTTGGTCAGAAAACACAAtttttttAT 6108 | | |||| ||| ||| | | | || | |||||| ||||||||||||||||| | Sbjct 1316 CTGGCGATGGTTTT--TGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGT 1373 Query 6109 TGTCAAGTTTGGTGGCAAATGATCCATACAGGGCGTTGGATAAAAGTTTGGCAATGGATC 6168 |||| | ||| |||||||| ||||| | ||||||||| | || || || ||| || Sbjct 1374 TGTCCAATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTC 1433 Query 6169 GCATGGTTTGGTTCTTTTCCTTGTCCGCGCGCTCTTTGGCGGCGATGTTGAGTTGGACAT 6228 ||||||||||||||||||| ||||| || |||||||| ||||||| || || || | Sbjct 1434 GCATGGTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGT 1493 Query 6229 ACTCGCGTGCCAGGCACTTCCATTCGGGGAAGATAGTTGTTAATTCATCTGGCACGATTC 6288 | || |||| ||||||||| || |||||||| |||||| ||| ||||| | || | Sbjct 1494 ATTCTTTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGC 1553 Query 6289 TCACTTGCCACCCTCGATTATGCAAGGTAATTAAATCCACACTGGTGGCCACCTCGCCTC 6348 |||| ||| |||| || ||||| ||||| || || | | || || || || |||| Sbjct 1554 GCACTGCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTC 1613 Query 6349 GAAGGGGTTCATTGGTCCAACAGAGCCTACCTCCTTTCCTAGAACAGAAAGGGGGAAGTG 6408 | | || || || ||||| || ||||| || ||||| || || || || || || ||| Sbjct 1614 GCAAAGGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTT 1673 Query 6409 GGTCTAGCATAAGTTCATCGGGAGGGTCTGCATCCATGGTAAAGATTCCCGGAAGTAAAT 6468 || || | | || || ||||| || || || ||||| || || || ||||| | | Sbjct 1674 CATCAAGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGAC 1733 Query 6469 CCTTATCAAAATAGCTGATGGGAGTGGGGTCA--TCTAAGGCCATTTG--CCATTCTCGA 6524 || ||||||||| | | || | | | | | || | || ||||||| Sbjct 1734 ACTCGTCAAAATAG-TCAATTTTTTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTC 1792 Query 6525 GCTGCCAGTGCGCGCTCATATGGGTTAAGGGGACTGCCC-CAGGGCATGGGATGGGTGAG 6583 || || | || | ||||| || || | || |||||| | ||| | ||||| || || Sbjct 1793 GCAGCTAAGGCTCTTTCATACGGATTTAAAGG-CTGCCCGCTGGGAAAAGGATGCGTTAG 1851 Query 6584 AGCAGAGGCATACATGCCACAGATGTCATAGACGTAGATGGGATCCTCAAAGATGCCTAT 6643 |||| |||||||||||| ||||||||||| || || || || | || | |||||| || Sbjct 1852 AGCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAAT 1911 Query 6644 GTAGGTTGGATAGCATCGCCCCCCTCTGATACTTGCTCGCACATAGTCATATAGTTCATG 6703 || || |||||||| || || || | ||| || || || |||||||| | |||||| Sbjct 1912 ATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATG 1971 Query 6704 TGATGGCGCTAGCAGCCCCGGACCCAAGTTGGTGCGATTGGGTTTTTCTGTTCTGTAGAC 6763 ||||| |||| | | | ||||| | ||| || | || |||||| | Sbjct 1972 AGATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCTAACTTCTCTGTATAA 2031 Query 6764 GATCTGGCGAAAGATGGCGTGAGAATTGGAAGAGATGGTGGGTCTTTGAAAAATGTTGAA 6823 || || ||| || || ||||| || || || |||||||||||||||||||| || Sbjct 2032 TATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTT-AA 2090 Query 6824 ATG-GGCATGAGGT-AGACCTACAGAGTCTCTGACAAAGTGGGCATAAGATTCTTGAAGC 6881 ||| |||| |||| || | ||| | | ||||| ||||||||||| || Sbjct 2091 ATGAAGCATCAGGTAAGTTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGT 2149 Query 6882 TTGGTTACCAGTTCGGCGGTGACAAGTACGTCTAGGGCGCAGTAGTCAAGTGTTTCTTGA 6941 ||| |||| || | | || || | |||||| | | || |||| || |||| || Sbjct 2150 TTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGG 2209 Query 6942 ATGATGTCATAA----CCTGGTTGGTTTTTCTTTTCCCACAGTTCGCGGTTGAGAAGGTA 6997 || ||||| ||| || ||| ||||||| | |||||| | |||||| | || Sbjct 2210 ATTATGTCGTAAGCCCCCACGTT--TTTTTCTCT--CCACAGAGCCTTGTTGAGTTGATA 2265 Query 6998 TTCTTCGC--GATCCTTCCAGTACTCTTCTAGC--GGAAACCCGTCTTTGTCTGCACGGT 7053 ||||||| ||| |||||||| |||| || ||||| || || | ||| ||| Sbjct 2266 CTCTTCGCTGGAT--TTCCAGTA-TCTT-AGGCTTGGAAAGCCATCCTCATCTTGTTGGT 2321 Query 7054 AAGATCCTAGCATGTAGAACTGATTAACTGCCTTGTAAGGGCAGCAGCCCTTCTCTACGG 7113 |||| |||| | ||||| | ||| ||||| | ||| || |||| || || ||||| | Sbjct 2322 AAGACCCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAG 2381 Query 7114 GTAGAGAGTATGCTTGAGCAGCTTTTCGTAGCGAAGCGTGAGTAAGGGCAAAGGTGTCTC 7173 | || ||| || |||||| |||| || || ||| || || ||||| ||||||| Sbjct 2382 GCAGCTCGTAAGCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAAGTGTCTC 2441 Query 7174 TGACCATGACTTTGAGAAATTGGTATTTGAAGTCCATGTC-GTCACAGGC--TCCCTGTT 7230 | ||||| | ||| | ||| ||||| ||| |||| | | || | || ||| | Sbjct 2442 TTACCATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGA---GCTTTCCACACT 2498 Query 7231 CCCAGAGTTGGAAGTCTACCCGTTTCTTGTAGGCGGGGTTGGGCAAAGCGAAAGTAACAT 7290 |||| ||| ||| ||||| | ||| || || || || |||| || | Sbjct 2499 CCCAATCGGCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGT 2558 Query 7291 CATTGAAGAGAATCTTACCGGCTCTGGGCATAAAATTGCGAGTGATGCGGAAAGGCTGTG 7350 ||||||| || || |||||| ||| ||||||||||| | | | || ||||| | Sbjct 2559 CATTGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCA 2618 Query 7351 GTACTTCCGCTCGATTGTTGATCACCTGGGCAGCTAGGACGATTTCGTCGAAACCGTTGA 7410 | || |||| || |||| || || || || || | ||||| || || |||||| || Sbjct 2619 GAACATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGA 2678 Query 7411 TGTTGTGTCC 7420 ||||||| || Sbjct 2679 TGTTGTGGCC 2688 Score = 134 bits (148), Expect = 3e-27 Identities = 373/571 (65%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 8637 TGAACCTGAAAGAGAGTTCAACAGAATCAATTTCGGTATCGTTAACGGCAGCTTGTCTCA 8696 ||||||||||||| | ||| | ||| ||||| || | || ||||| || |||| | | Sbjct 3746 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 3805 Query 8697 GTATTTCTTGTACGTCACCAGAGTTGTCCTGGTAGGCGATCTCCGCCATGAACTGCTCGA 8756 || || ||||| || ||| || || || || || || ||||| |||||||| | Sbjct 3806 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 3865 Query 8757 TTTCTTCCTCCTGAAGATCTCCGCGACCCGCTCTTTCGACGGTGGCCGCGAGGTCATTGG 8816 | ||||||| || | ||||| | || ||||| || || ||||| || | |||| || Sbjct 3866 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 3925 Query 8817 AGATACGGCCCATGA-GTTGGGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTG 8875 || || ||||| ||| | || || | || || ||||| || | |||| Sbjct 3926 TAATGCGAGACATGATGTTACTAAAA-GCCTGTTCCCCATTTTCATTCCACACTCTGCTG 3984 Query 8876 TAAACCACGGCCCCCTCGGAGTCTCTTGCGCGCATCACCACCTGAGCGAGGTTAAGCTCC 8935 || || | || || || ||| || | ||| || ||||| || || |||||| | Sbjct 3985 TACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATC 4044 Query 8936 ACGTGTCT-------GGTGAAGACCGCATAGTTGCATAGGCGCTGAAAAAGGTAGTTGAG 8988 || | ||| || ||||| | || || | ||| | |||||| || Sbjct 4045 ACATATCTCCCAAAAGGGGAAGATACCCTAATTT-------GGTGATTTAAGTAGTTTAG 4097 Query 8989 TGTGGTGGCAATGTGTTCGGCGACGAAGAAATACATGATCCATCGTCTCAGCGGCATTTC 9048 |||||| ||||||||||| || || || || |||| | ||| ||| || | |||| Sbjct 4098 TGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTC 4157 Query 9049 GCTAACATCGCCCAGAGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAATT 9108 ||| || || || || ||||| |||| || |||| || || | || ||||| || Sbjct 4158 ATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTT 4217 Query 9109 AAAAAACTGGGAGTTTCGCGCGGACACGGTCAATTCCTCCTCGAGAAGACGGATGAGTTC 9168 ||||||||| ||||| || ||||| || | || || || | | || ||| ||| Sbjct 4218 AAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTC 4277 Query 9169 GGCTATGGTGGCCCGTACTTCGCGTTCGAAG 9199 || | | || || ||||||| ||| ||| Sbjct 4278 TGCCACAGCGGTCCTAACTTCGCTTTCAAAG 4308 >seq1393656 Length=1543 Score = 134 bits (148), Expect = 3e-27 Identities = 373/571 (65%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 8637 TGAACCTGAAAGAGAGTTCAACAGAATCAATTTCGGTATCGTTAACGGCAGCTTGTCTCA 8696 ||||||||||||| | ||| | ||| ||||| || | || ||||| || |||| | | Sbjct 54 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 113 Query 8697 GTATTTCTTGTACGTCACCAGAGTTGTCCTGGTAGGCGATCTCCGCCATGAACTGCTCGA 8756 || || ||||| || ||| || || || || || || ||||| |||||||| | Sbjct 114 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 173 Query 8757 TTTCTTCCTCCTGAAGATCTCCGCGACCCGCTCTTTCGACGGTGGCCGCGAGGTCATTGG 8816 | ||||||| || | ||||| | || ||||| || || ||||| || | |||| || Sbjct 174 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 233 Query 8817 AGATACGGCCCATGA-GTTGGGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTG 8875 || || ||||| ||| | || || | || || ||||| || | |||| Sbjct 234 TAATGCGAGACATGATGTTACTAAAA-GCCTGTTCCCCATTTTCATTCCACACTCTGCTG 292 Query 8876 TAAACCACGGCCCCCTCGGAGTCTCTTGCGCGCATCACCACCTGAGCGAGGTTAAGCTCC 8935 || || | || || || ||| || | ||| || ||||| || || |||||| | Sbjct 293 TACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATC 352 Query 8936 ACGTGTCT-------GGTGAAGACCGCATAGTTGCATAGGCGCTGAAAAAGGTAGTTGAG 8988 || | ||| || ||||| | || || | ||| | |||||| || Sbjct 353 ACATATCTCCCAAAAGGGGAAGATACCCTAATTT-------GGTGATTTAAGTAGTTTAG 405 Query 8989 TGTGGTGGCAATGTGTTCGGCGACGAAGAAATACATGATCCATCGTCTCAGCGGCATTTC 9048 |||||| ||||||||||| || || || || |||| | ||| ||| || | |||| Sbjct 406 TGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTC 465 Query 9049 GCTAACATCGCCCAGAGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAATT 9108 ||| || || || || ||||| |||| || |||| || || | || ||||| || Sbjct 466 ATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTT 525 Query 9109 AAAAAACTGGGAGTTTCGCGCGGACACGGTCAATTCCTCCTCGAGAAGACGGATGAGTTC 9168 ||||||||| ||||| || ||||| || | || || || | | || ||| ||| Sbjct 526 AAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTC 585 Query 9169 GGCTATGGTGGCCCGTACTTCGCGTTCGAAG 9199 || | | || || ||||||| ||| ||| Sbjct 586 TGCCACAGCGGTCCTAACTTCGCTTTCAAAG 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97676857910040