Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq256579 82.4 7e-11 seq39000 82.4 7e-11 >seq256579 Length=8500 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/107 (78%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| || || || ||||| || || || ||||| ||||| || || ||||||||| Sbjct 857 AGACAAGCAAAATCACAATGAAGACCCTCATCTCTTGAAATAAGCTCATTAGAAAAAGTT 798 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA 16305 || ||||||||| || |||||||| ||||| ||||| ||| |||| Sbjct 797 AAACCTGGCATTAAGCCCCGTTTCTTCAACCAAAATATGGCA-CAAA 752 >seq39000 Length=31331 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 ||||| || |||||||||||||| ||| ||||| ||| |||||| ||||| ||||| Sbjct 29536 ATAAGATCATTGGAAAAAGTTAAACCTAGCATTAATCCCTATTTCTTCAACCAAAATATG 29595 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGAT 16347 || |||| | | ||||| |||||||||||| ||||||| || || Sbjct 29596 ACACAAAATCTTCTATAGAAGAAAATACCCTCAACACATGCAAATGCAAT 29645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445865809047400