Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq1966556 479 8e-131 seq248305 450 4e-122 seq1600686 91.5 4e-14 seq1234673 91.5 4e-14 seq595170 91.5 4e-14 seq537025 86.0 2e-12 >seq1966556 Length=1002 Score = 479 bits (530), Expect = 8e-131 Identities = 270/272 (99%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 31089 TTCTTCGTCTGTTTCTACTGGTATTGGCACAAACCTGATTCCAATTTGAGCAAGGCTATG 31148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 550 TTCTTCGTCTGTTTCTACTGGTATTGGCACAAACCTGATTCCAATTTGAGCAAGGCTATG 609 Query 31149 TGCCATCTCGATACTCGTTCTTAACTCAACAGAAGATGCTTTGTGCATACAGCCCCTCGT 31208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610 TGCCATCTCGATACTCGTTCTTAACTCAACAGAAGATGCTTTGTGCATACAGCCCCTCGT 669 Query 31209 TTATTATTTATCTCCTCAGCCAGCCGCTGTGCTTTCAGTGGATTTCGGATAACAGAAAGG 31268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 670 TTATTATTTATCTCCTCAGCCAGCCGCTGTGCTTTCAGTGGATTTCGGATAACAGAAAGG 729 Query 31269 CCGGGAAATACCCAGCCTCGCTTTGTAACGGAGT--AGACGAAAGTGATTGCGCCTACCC 31326 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 730 CCGGGAAATACCCAGCCTCGCTTTGTAACGGAGTAGAGACGAAAGTGATTGCGCCTACCC 789 Query 31327 GGATATTATCGTGAGGATGCGTCATCGCCATT 31358 |||||||||||||||||||||||||||||||| Sbjct 790 GGATATTATCGTGAGGATGCGTCATCGCCATT 821 Score = 470 bits (520), Expect = 4e-128 Identities = 262/263 (99%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 27480 AGCTTTGCACTGGATTGCGAGGCTTTGTGCTTCTCTGGAGTGCGACAGGTTTGATGACAA 27539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 AGCTTTGCACTGGATTGCGAGGCTTTGTGCTTCTCTGGAGTGCGACAGGTTTGATGACAA 487 Query 27540 AAAATTAGCGCAAGAAGACAAAAATCACCTTGCGCTAATGCTCTGTTACAGGTCACTAAT 27599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 AAAATTAGCGCAAGAAGACAAAAATCACCTTGCGCTAATGCTCTGTTACAGGTCACTAAT 427 Query 27600 ACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGT 27659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 ACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGT 367 Query 27660 CTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCG 27719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 CTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCG 307 Query 27720 TTCAGCTTTTTTATACTAAGTTG 27742 ||||||||||||||||||| ||| Sbjct 306 TTCAGCTTTTTTATACTAACTTG 284 >seq248305 Length=8731 Score = 450 bits (498), Expect = 4e-122 Identities = 249/249 (100%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 21260 TGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGGCAGGCGTTTGACAAA 21319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8479 TGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGGCAGGCGTTTGACAAA 8538 Query 21320 TCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCTTCCTGATATGCGAGGC 21379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8539 TCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCTTCCTGATATGCGAGGC 8598 Query 21380 TGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATTGTCTCAGGAACAGGATGGA 21439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8599 TGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATTGTCTCAGGAACAGGATGGA 8658 Query 21440 ATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGATTTGGGGACGAAAACCACA 21499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8659 ATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGATTTGGGGACGAAAACCACA 8718 Query 21500 TCGTCGTTT 21508 ||||||||| Sbjct 8719 TCGTCGTTT 8727 >seq1600686 Length=1301 Score = 91.5 bits (100), Expect = 4e-14 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 69 CGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAA 118 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1209 CGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAA 1258 >seq1234673 Length=1771 Score = 91.5 bits (100), Expect = 4e-14 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 27 ATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTTCGTCATAA 76 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1722 ATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTTCGTCATAA 1771 >seq595170 Length=3628 Score = 91.5 bits (100), Expect = 4e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 48284 GTTCTGTTCTTCGTTGACATGAGGTTGCCCCGTATTCAGTGTCGCTGATTTGTATTGT 48341 ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| Sbjct 2886 GTTCTGTTCTTAGTTGACATGAGGTTGCCCCGTATTCAGTGTCGCTGATTAGTTTTGT 2943 >seq537025 Length=4031 Score = 86.0 bits (94), Expect = 2e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 47378 AGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTT 47427 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 78 AGAATAAAACAATTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTT 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136201267169760