Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq544196 95.1 9e-15 seq134495 82.4 5e-11 >seq544196 Length=3977 Score = 95.1 bits (104), Expect = 9e-15 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 25014 TTTATAAGTAATAG-TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCAT 25072 ||||||| | ||| | | ||||||||||||||||| || | ||||||| || ||||| Sbjct 1389 TTTATAAATTTTAGATTTTAAAATGCAAATATTCATGAAGATGTTGACGGA-AAGACCAT 1331 Query 25073 TACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAA 25132 | || || | | || ||| | | || ||||| || ||| || || Sbjct 1330 AAATCTTGAGGTTGAGAGCTCTGATACGATTGATAATGTCAAGGCTAAGATTCAAGACAA 1271 Query 25133 AGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC 25192 |||||| | || |||||||| || || || |||| |||||| ||| |||| ||| Sbjct 1270 GGAAGGTATTCCTCCTGATCAACAGAGGCTCATTTTTGTGGGCAAGCAACTGGAGGATGG 1211 Query 25193 CAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 | ||| | |||||||| |||||||| ||||||||||| |||||| | || || Sbjct 1210 CCGAACCCTAGCCGATTATAATATTCAGAAGGAATCTACCCTTCACCTTGTCTT 1157 >seq134495 Length=14222 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || |||||||| || || || ||||||||||| || |||| Sbjct 3832 GACAAGGAAGGTATTCCTCCTGATCAACAGAGGCTCATTTTTGCGGGCAAGCAGCTGGAG 3773 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| | |||||||| || ||||| ||||||||||| |||||| | || || Sbjct 3772 GATGGCCGAACCCTCGCCGATTATAACATTCAGAAGGAATCTACCCTTCACCTTGTCTTG 3713 Query 25248 CGATTACGAGGAGGG 25262 || | || || ||| Sbjct 3712 CGTCTGCGTGGTGGG 3698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359460794164730