Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq17269 104 3e-17 seq10126054 98.7 1e-15 seq6242390 98.7 1e-15 seq3250489 89.7 7e-13 seq407441 89.7 7e-13 seq67916 89.7 7e-13 seq11925 89.7 7e-13 seq134495 87.8 2e-12 seq2365535 86.0 8e-12 seq2224118 86.0 8e-12 seq111374 86.0 8e-12 seq73042 84.2 3e-11 seq63013 84.2 3e-11 seq49525 82.4 1e-10 >seq17269 Length=41791 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || || ||||| ||||| ||||| | Sbjct 36782 CCACCTCTCAGACGAAGTACCAGGTGTAGGGTTGACTCTTTCTGAATATTGTAATCAGCC 36841 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || || || || |||||||||||||| | |||||| || |||||| Sbjct 36842 AGAGTTCTCCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCGTTGCTGGTCAGGAGGA 36901 Query 146171 ATTCCTTCTTTATCTTG 146187 || || ||||||||||| Sbjct 36902 ATACCCTCTTTATCTTG 36918 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 ||||| |||| || || ||||| ||||| ||||| | |||||||| | ||| || Sbjct 17112 TACCAGGTGTAGGGTTGACTCTTTTTTAATATTGTAATCAGCCAGAGTTCTCCCATCCTC 17171 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || || ||||||||||||||||||| ||| || || ||||||| || || |||||||| Sbjct 17172 CAACTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCAAGAGGAATACCCTCCTTATCTTG 17231 >seq10126054 Length=201 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||||||||| | || | || || || ||||| || |||||||| || | | Sbjct 23 CCACCTCTAAGTCGGAGGACGAGGTGCAAGGTGGATTCCTTCTGAATATTATAGTCAGCA 82 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || |||| || ||| ||||| |||||||||||||| ||||| | ||||| || ||||| Sbjct 83 AGGGTTCGGCCATCTTCTAACTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 142 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| || || Sbjct 143 ATGCCTTCTTTGTCCTG 159 >seq6242390 Length=278 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 |||||||| || ||||| ||||||| |||||| || | ||| || | ||| || ||| Sbjct 4 GTAGATTCCTTCTGAATATTGTAATCTGCAAGAGTCCTTCCATCTTCAAGTTGCTTCCCA 63 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||| ||||| || |||||||| ||||||||||| |||||||| || Sbjct 64 GCAAATATCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTATCCTG 110 >seq3250489 Length=488 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||||||||| | || | ||| | || ||||| || ||||| || || | | Sbjct 322 CCACCTCTAAGTCGGAGGACGAGATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGCA 381 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || |||| || ||| ||||| || ||||||||||| ||||| | |||||||| ||||| Sbjct 382 AGGGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAGATCAAACGCTGCTGATCAGGAGGG 441 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 442 ATGCCTTCCTTGTCCTG 458 >seq407441 Length=5406 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || ||||| || | ||| ||||| || ||||||||||||| ||||||| | ||| Sbjct 2639 AAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGCTAGAGTTCGCCCATCT 2580 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 |||| |||||||||||||| || || | |||||||| |||||||| || || || || Sbjct 2579 TCTAGCTGTTTTCCAGCAAATATTAAGCGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 2520 Query 146186 TG 146187 || Sbjct 2519 TG 2518 >seq67916 Length=22924 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | || | || | || ||||| || |||||||| || | | Sbjct 19356 CCACCTCTCAGTCGGAGGACGAGGTGCAGGGTGGATTCCTTCTGAATATTATAGTCAGCA 19415 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || |||| || ||| |||||||| ||||||||||| ||||| | |||||| || || || Sbjct 19416 AGGGTTCGGCCATCTTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGGGGG 19475 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| ||||| || Sbjct 19476 ATGCCTTCCTTATCCTG 19492 >seq11925 Length=47080 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || ||||| || | ||| ||||| || ||||||||||||| ||||||| | ||| Sbjct 4015 AAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGCTAGAGTTCGCCCATCT 4074 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 |||| |||||||||||||| || || | |||||||| |||||||| || || || || Sbjct 4075 TCTAGCTGTTTTCCAGCAAATATTAAGCGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 4134 Query 146186 TG 146187 || Sbjct 4135 TG 4136 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || ||||| || | ||| ||||| || ||||||||||||| ||||||| | ||| Sbjct 11070 AAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGCTAGAGTTCGCCCATCT 11129 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 |||| |||||||||| ||| || || | |||||||| |||||||| || || || || Sbjct 11130 TCTAGCTGTTTTCCAGTAAATATTAAGCGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 11189 Query 146186 TG 146187 || Sbjct 11190 TG 11191 >seq134495 Length=14222 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 146074 ATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATT 146132 ||| || |||||||| ||| || || || || || | ||||| || | ||| || | || Sbjct 3950 ATGCAATGTAGATTCCTTTTGA-ATGTTGTAGTCGGCTAGAGTCCTCCCATCTTCAAGTT 4008 Query 146133 GTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||||| ||||| |||||||| ||||||||||||||||| || || ||||| || Sbjct 4009 GCTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 4063 >seq2365535 Length=728 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | || | || | || ||||| || |||||||| || | | Sbjct 617 CCACCTCTCAGTCGGAGGACGAGGTGCAGGGTGGATTCCTTCTGAATATTATAGTCAGCA 558 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || |||| || ||| |||||||| ||||||||||| ||||| | |||||| || || || Sbjct 557 AGGGTTCGGCCATCTTCTAATTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGGGGG 498 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 497 ATGCCTTCCTTGTCCTG 481 >seq2224118 Length=809 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || || | ||| ||||| ||||| | Sbjct 658 CCACCTCTCAGACCAAGTACCAGGTGTAGGGTTGAATTTTTCTGAATATTGTAATCAGCC 717 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| | || || || ||||||||||||||| || ||| || |||||| Sbjct 718 AGAGTTCTCCCATCCTTCAACTGCTTGCCAGCAAAAATCAATTGTTTCTGGTCAGGAGGA 777 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 778 ATACCCTCCTTATCTTG 794 >seq111374 Length=16363 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||||||||| | ||||| || ||| || | || ||||||||||| |||||||| Sbjct 8171 ATATTATAATCAGCCAGAGTCCTATCATCTTCAAGCTGCTTTCCAGCAAAGATCAATCTC 8230 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| || ||||||||||| || ||||| Sbjct 8231 TGCTGATCTGGGGGAATTCCTTCCTTGTCTTG 8262 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | | |||| || | ||| ||||| || ||||| ||||| | Sbjct 8580 TTCCACCTCTGAGGCGAAGGACCAGGTGAAGAGTGGATTCCTTTTGGATATTGTAATCAG 8639 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||| || | | ||| || || || ||||||||||| || | || |||||| || |||| Sbjct 8640 CAAGGGTCCGTCCATCCTCCAACTGCTTTCCAGCAAATATGAGTCGTTGCTGGTCAGGAG 8699 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| ||||| || ||||| Sbjct 8700 GAATGCCTTCCTTGTCTTG 8718 >seq73042 Length=21847 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| || | | |||| || | ||||||||| || || |||||||||| Sbjct 446 TTCCCCCTCTGAGACGGAGGACCATGTGAAGAGTAGATTCCTTCTGAATGTTATAATCTG 505 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||| || ||| || | ||||| ||||||||||| | || |||||||| || | Sbjct 506 CGAGGGTTCGGCCATCCTCAAGCTGTTTGCCAGCAAAAATGAGCCTCTGCTGATCAGGGG 565 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| || || || || Sbjct 566 GAATTCCCTCCTTGTCCTG 584 >seq63013 Length=24078 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 |||||||| || || |||||||| | ||||| |||| || || | ||| || || Sbjct 11201 GTAGATTCCTTTTCAATGTTATAATCCGCTAGAGTCCTGCCATTTTCAAGTTGCTTACCT 11260 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 ||||| |||||||| ||||||||||||||||| || || ||||| Sbjct 11261 GCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATC 11304 >seq49525 Length=27753 Score = 82.4 bits (90), Expect = 1e-10 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 || || || || || |||| || | || | || || ||||| |||||||||||| Sbjct 1494 GTACCCCCCCTTAGCCTTAGGACAAGGTGAAGTGTTGACTCTTTCTGAATATTATAATCT 1435 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | ||||| || | |||||||| || || |||||||| |||| ||| |||||||| || Sbjct 1434 GCAAGAGATCGTCCATCATCTAGCTGCTTCCCAGCAAATATCAGTCTCTGCTGATCTGGG 1375 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || ||||| || || || Sbjct 1374 GGGATACCTTCCTTGTCCTG 1355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648227738374400