Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq5586464 138 2e-28 >seq5586464 Length=299 Score = 138 bits (152), Expect = 2e-28 Identities = 215/303 (71%), Gaps = 11/303 (4%) Strand=Plus/Minus Query 9765 CGCTTACCATCAGTGGCTGTCCCGCCGTGACGCCCTGCAGCCTGGAGTCAGCGGCA---C 9821 |||||||| ||||||| ||||| | ||| ||| |||| |||| | |||| || | Sbjct 296 CGCTTACCGTCAGTGGTTGTCCGGTAGTGGTGCCGTGCACCCTGCA---AGCGACATCCC 240 Query 9822 CGAAGGACAACGGCGGTCTACAGACTGAGGTCGAGCGTATCGGCCTGGCCTGGGCCGAGT 9881 | || ||||||| ||| |||||| ||||| | || |||||||| ||||| | Sbjct 239 CAAACCGCAACGGCCAATTACTGACTGACCAGGAGCGCACCGAACTGGCCTGAGCCGAAT 180 Query 9882 GCGCCGCGAAGGTCGACAT-GATCATCCGCACCCAAGGGGCTACCCATGAACAAGCCCGA 9940 | ||||| ||||||| | | | | | ||||| ||| | |||||||||||||||| | Sbjct 179 GTGCCGCCCAGGTCGATCTCGTTTACCAGCACC--AGGTG--ACCCATGAACAAGCCCAA 124 Query 9941 TAGCCTGAAAGCGCATCTGCTCGCCGCCGTGCCGGAACTCAGGAACAACGGCGACCGCCT 10000 |||||| | ||| |||||||| || || || | ||| | ||||||| ||| ||||| Sbjct 123 TAGCCTTCGCGAGCACCTGCTCGCAGCAGTACCAGGACTGAAGAACAACCCCGAGCGCCT 64 Query 10001 GGTGATATTCATCGACAACGGCCGGGTCCGCAGCACCTCGGCCGAGAGCCTGTCCTTCGA 10060 | | || || |||| ||| ||| | |||| |||| | |||||||||||||| Sbjct 63 GATCATGTTTGTCGATGCTGGCAAGGTGAGGTGCACTGCGGCTGCAAGCCTGTCCTTCGA 4 Query 10061 ATA 10063 ||| Sbjct 3 ATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99885800547780