Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq256579 109 5e-19 seq346720 86.0 5e-12 >seq256579 Length=8500 Score = 109 bits (120), Expect = 5e-19 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| ||||||||||||||||| ||||||||||| |||||| || || ||||| ||||| Sbjct 855 ACAAGCAAAATCACAATGAAGACCCTCATCTCTTGAAATAAGCTCATTAGAAAAAGTTAA 796 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 |||||||| || || ||||| || ||||||||||| ||| Sbjct 795 ACCTGGCATTAAGCCCCGTTTCTTCAACCAAAATATGGCA 756 >seq346720 Length=6433 Score = 86.0 bits (94), Expect = 5e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 ||||| ||||||||||| |||||||||||||| || ||| || || |||||||| ||| Sbjct 3861 AAACAGGCAAAATCACAGTGAAGGCCCTCATCCCTTGAAATGAGCTCATTTGAAAAAGTT 3802 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTG 13756 | |||||||| | || | ||| || ||||| || |||| Sbjct 3801 AGGCCTGGCATTAGACCCCTTTTCTTCAACCAGAAGATTG 3762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418783837656200