Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_004037.2 Length=29576 Score E Sequences producing significant alignments: (Bits) Value seq416950 102 1e-17 >seq416950 Length=5269 Score = 102 bits (112), Expect = 1e-17 Identities = 244/361 (68%), Gaps = 6/361 (2%) Strand=Plus/Plus Query 4523 TGTCTTTTAAAGCATATAATTTAGGAGCTA-AAATACATGTTTCTGAACTGAATGCTTCA 4581 ||| |||||||||||| | ||||||||| | ||| ||| | ||| ||||| || || ||| Sbjct 702 TGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACA-GATTCAGAACTAAAAGCATCA 760 Query 4582 GCTCCGCAACGGTTACAAACAGTTTCGCATTCAACCAACCAAGTTAGACATGGATGTTTT 4641 | || | ||| ||| || |||||||||||||| || | | |||| | |||| Sbjct 761 GACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAATAGATGGGTTTTTT 820 Query 4642 TCATCAAAGATTAAATTTGAGTTATATTTTTTAAGTCTATGTAATCCT-TTTGATAACAT 4700 |||||| | || || || ||| |||| | ||| ||| |||| | ||| Sbjct 821 GGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTC-CAT 879 Query 4701 GAGTTGGTGGCCCTTTTCTGTTAAGAATAACGAGTCTGTATCACCATAAATACTTTTTAT 4760 ||| |||| |||| ||| || | || || ||| || || || || | | |||||| Sbjct 880 GAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTAT 939 Query 4761 CTCCCTTTCTATGTAA-GGTTTACCCATATCTTCCCCATATAAAATTTCTGCCCACTCAC 4819 ||| ||||| || || || | ||||| | ||||||| ||||||||||||| Sbjct 940 AGTTTTTTG-ATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAG 998 Query 4820 TCATGAAAGCTCTGGTCCAAGCCAGCACAAAGGATGCTATCTGAGTTGGATATCGGTTGT 4879 || || |||| ||||| |||| ||||| || || || || | | || | ||||| Sbjct 999 ACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGT 1058 Query 4880 T 4880 | Sbjct 1059 T 1059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83318095825615