Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq1344 372 8e-99 >seq1344 Length=81602 Score = 372 bits (412), Expect = 8e-99 Identities = 1105/1690 (65%), Gaps = 43/1690 (3%) Strand=Plus/Plus Query 21703 GCAGTTTTAATACAGCGCATAATGATTTTCCGTGAGATATTCTCAGCTTCAGCTAATTTA 21762 || || || |||||||| |||| || || ||||| ||||| || || ||||| | | Sbjct 526 GCGGTGTTGATACAGCGGGTAATAATCTTACGTGAAATATTTTCCGCATCAGCCAGCGCA 585 Query 21763 CTTACATTCCCATCAAAATCATTATGCAGACGGCGTGAATAACGTTGGCCGCGCTCAAAT 21822 | ||| ||| |||| ||||| |||| |||| || |||||| || || || ||| | Sbjct 586 GAAATATTTCCAGCAAATTCATTCTGCAATCGGCTTGCATAACGCTGACCACGTTCATAA 645 Query 21823 GCTGATGTAGGTCGGTAATCGTTACCGATTTGCGACAGCCATGCCATTTGCTCTTCGTCT 21882 || ||| || || ||||||||||| | | || | ||||| ||||| || || Sbjct 646 GCACTTGTTGGGCGATAATCGTTACCCAATCTGGATAATGCAGCCATCTGCTCATCATCC 705 Query 21883 AAATCCCCGACAAGGACCCGATAATCTGTTTTTGTAATTATTGCAGTTTTGCGGCGGCGA 21942 | || || || || || |||||||| ||| |||| | |||| ||| || |||||| Sbjct 706 AGCTCGCCAACCAGAACACGATAATCACTTTCGGTAAGTGCAGCAGCTTTACGACGGCGA 765 Query 21943 CTGCCATCAGCTACTTCTATAACGCCGTTTACTTCGCGGCCATAGGCAGGGTTCTGCTGG 22002 || ||||| || | |||||| || || |||| || || | || || |||| || Sbjct 766 CTCCCATCGGCAATTTCTATGACACCAGATACTCTTCGACCGAACGCCGGTGTCTGTTGA 825 Query 22003 CCAGATAATTTGAATGAAGGGATCAGGTCATCTAATGCGGTTTCAGTTAGCAACTCTTGG 22062 |||| | | || |||||||| || ||||| | |||| ||||| |||| ||||||| Sbjct 826 CCAGTCAGTAGAAAAGAAGGGATGAGATCATCCAGTGCGTCCTCAGTAAGCAGCTCTTGG 885 Query 22063 TCACGCTCATTCCCGCACCAAACCATTGTGGCCTTATTAACTCTTTCTGCTGGTATGGTT 22122 ||||| ||||| || |||| ||| | || ||| | ||| || || | | | | Sbjct 886 TCACGTTCATTACCTGACCATACCCGAGAGGTCTTCTCAACACTATCACCCCGGAGCACT 945 Query 22123 TTAAGAACAAAATGAACATCACGGCCACAGACAGAAAGGGTAATCTGATTACCG---GTC 22179 | |||| ||| | ||||| || ||||| |||| | ||||| ||||||| | | Sbjct 946 TCAAGAGTAAACTTCACATCCCGACCACATACAGGCAAAGTAATGGCATTACCGCGAGCC 1005 Query 22180 ATTGCATTAACGCGAGATGTTAACTGTGAAACTGCT---GGAGCAGCTGGTTGCCGAGTT 22236 ||| | ||||| | ||||| ||| | | || ||||||||| | ||| | Sbjct 1006 ATTACTCCTACGCGCGCAATTAAC---GAATCCACCATCGGGGCAGCTGGT-GTCGA--T 1059 Query 22237 ACAGAGCCAGGCGCTGGGACCGTGGTCGCATTATTCATTTCG-ATTTTTGGGGCGTTCTT 22295 | || || || |||| || | | |||| | || || ||| || Sbjct 1060 AACGA---AGTATCTTCAACCG--GTTG-AGTATTGAG--CGTATGTTTTGGA------- 1104 Query 22296 CATTACTGGTGCACGTTTCATT-TCAAATTCTCCCAACGCGGCTTAATTAAGCGATTATA 22354 || || || ||||| |||||| || ||| |||||| || || ||||| | |||| | Sbjct 1105 -ATAACAGGCGCACGCTTCATTATCTAAT-CTCCCAGCGTGGTTTAATCAGACGATCGAA 1162 Query 22355 AATTTCTGCACAAACCGGCTCCCAGATAGCCACAGCATTGCGCCAGGCATTTGGAGTACT 22414 |||||| || || || ||||| |||| | |||||| | ||||||| | | | Sbjct 1163 AATTTCATTGCAGACAGGTTCCCAAATAGAAAGAGCATTTCTCCAGGCACCAGTTGAAGA 1222 Query 22415 ACGTTGGTTAGCGGCTTGTTCGAACACAGTTCGCATACGAACTTGTCCTTTACCTACTTC 22474 ||||| | | ||| ||||| || ||||||| ||| || | || |||||||| ||||| Sbjct 1223 GCGTTGATCAATGGCCTGTTCAAAAACAGTTCTCATCCGGATCTGACCTTTACCAACTTC 1282 Query 22475 GTCAGTTACTCGAACAACTTCTTTAAGGACCATGCTGCCCCAAGCATCACGTATATGGTC 22534 || ||| | || ||||| | ||| || |||||||| ||||| ||||| || || || || Sbjct 1283 ATCCGTTTCACGCACAACATTTTTTAGAACCATGCTTCCCCAGGCATCCCGAATTTGCTC 1342 Query 22535 ATCCATCCACTGAGATTGGCTACCAACAGCATTACTGAATTTAGTAATCAATACCCTAAC 22594 ||||||||| | || || ||| | ||| ||| |||| |||| ||| | | ||| Sbjct 1343 CTCCATCCACGGGGACTGAGAGCCATTACTATTGCTGTATTTGGTAAGCAAAATACGAAC 1402 Query 22595 ATCAGGCTCAAACCCGCCGAGGTCCAC--TCCAGCCATAAGATCACGCAACATAGTGAAA 22652 ||||||||| ||||| || || || || | | |||||||| | |||| |||| Sbjct 1403 ATCAGGCTCGAACCCTTTAAGATCAACGTTCTTG--AGCAGATCACGAAGCATATCGAAA 1460 Query 22653 AATTGCAATGTGCTGACATAGTCATAAAGTTCAGCTGGAGTTGGTACAACAATGACATCA 22712 || |||| || | | |||||| | | ||||| || || || |||| | |||||| Sbjct 1461 AACTGCAGTGCGGAGGTGTAGTCAAACAACTCAGCAGGCGTGGGAACAATCAGCACATCA 1520 Query 22713 GCGGCACAAACCACATTTATTGTGCCTATGCCCAAGTTAGGTGCACTGTCTAAAACAACT 22772 || ||||| || ||||| || ||||| || |||| |||||| || ||||| | ||| | Sbjct 1521 GCAGCACATACGACATTAATCGTGCCGATACCCAGGTTAGGCGCGCTGTCAATAACTATG 1580 Query 22773 ACGTCATAGCTGTCCCATACGGACTCGATTGCAGCACGTAGCATCATGTGCGGTGCTACA 22832 || |||||| | || | || || || || ||||||| ||| || | Sbjct 1581 ACATCATAGTCATGAGCAACAGTTTCAATGGCCAGTCGGAGCATCAGGTGTGGATCGGTG 1640 Query 22833 GGGAGCTTTTCGGCATCA----TGCAAAGGATATAATTCAGACTCAATTCGATGGATGGC 22888 || || || | ||||| ||| | ||| |||| ||||| || || | || Sbjct 1641 GGCAGTTTACCTTCATCAAATTTGCCCA----TTAACTCAGTTTCAATACGGTGCAGAGC 1696 Query 22889 CAGACAGGATGGGATTATGTCCAGATTTGGCCAACATGTTGGTTTGATGGCGTACATAGC 22948 ||||||||| || || ||||| || ||||| || || || || || || || | | Sbjct 1697 CAGACAGGAAGGAATAATGTCAAGCCCCGGCCAGCAAGTGGGCTTTATTGCATAAGTGAC 1756 Query 22949 ATCATCACGTTCACCTAAGTAATAAGGGAGTAGAGTTTCGTCTTCGTGGATATGCAAATC 23008 ||| || ||| || | || |||| || ||||| || ||| | || ||||| | ||| Sbjct 1757 ATCGTCCTTTTCCCCAAGATAGAAAGGCAGGAGAGTGTCTTCTGCATGAATATGAAGATC 1816 Query 23009 AGGTACATACCCATGATAAAGGCTGGCGGTAGCTTGCGGATCTGTAGCATCAATCAATAG 23068 || || | || ||||| | ||| || | || || || || | || | | | Sbjct 1817 TGGAACCCATCCGTGATACATTGAGGCTGTTCCCTGGGGGTCGTTACCTTCCACGAGCAA 1876 Query 23069 TACGCGTAAGCCCTGCAATGCTAACCATTGAGCTGTATGCACTGAGGTACTTGTTTTGTA 23128 || |||| |||| || || || ||||| ||| || || | |||||||| Sbjct 1877 AACACGTAGCCCCTTCAGAGCCAAATCCTGAGCAAGATGAACAGAAACAGAGGTTTTGTA 1936 Query 23129 TGCGCCACCTTTATGTGCCGCTATAGCCAATACTACTGGGTCTTGCCCATCAGGTCGTTT 23188 |||| |||||||| || || | | | || ||| | | |||| ||| Sbjct 1937 AACGCCTCCTTTATGGGCAGCAACCCCGATCACCGGTGGAAATACGTCTTCAGCACGTCG 1996 Query 23189 CCAGCGTGTACCAAAATGATCCCGAAGGTCGTTAATTTGTTGAATCGTATATCCCGCTCT 23248 | | || || ||||| ||| || | | |||||||||| ||| ||||| || | | Sbjct 1997 CAATCGCGTTCCAAACACATCACGCATATGATTAATTTGTTCAATTGTATAACCAACACG 2056 Query 23249 TTGTGGCACTCTGCCACGTGTAACCATATCCGCAGGTGGCAATTTTCCTGAGTCCTCGCC 23308 ||| || | || || | ||||||||| | || | | |||| | |||| | Sbjct 2057 TTGCTCAACCCGTCCTCGAATTTCCATATCCGGGTGCGGTAGTCGCCCTGCTTTCTCGGC 2116 Query 23309 ATTGCGGATGGTCTGAGGGGTTACACCAACTAATTCTGCAGCTTCAGTAATACCCCATCG 23368 || | ||| | ||||| | || |||||||| || || |||||| || | ||| || Sbjct 2117 ATCTCTGATAGCCTGAGAAGAAACCCCAACTAAATCCGCTGCTTCACCTATTCTCCAGCG 2176 Query 23369 ACGAGTGATT 23378 || || ||| Sbjct 2177 CCGGGTTATT 2186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130122459376590