Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq33157 1344 0.0 seq53858 522 1e-143 seq519200 109 3e-19 seq2652797 91.5 8e-14 >seq33157 Length=33566 Score = 1344 bits (1490), Expect = 0.0 Identities = 759/768 (99%), Gaps = 0/768 (0%) Strand=Plus/Minus Query 22626 GGTAATGACTCAAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC 22685 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8453 GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC 8394 Query 22686 ATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTG 22745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8393 ATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTG 8334 Query 22746 CCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAG 22805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8333 CCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAG 8274 Query 22806 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC 22865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8273 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC 8214 Query 22866 AAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATCGTGCGTTCACCGAATAC 22925 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 8213 AAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATAC 8154 Query 22926 GTGCGCAACAACCGTCTTCCGGAGCCTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGA 22985 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 8153 GTGCGCAACAACCGTCTTCCGGAGACTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGA 8094 Query 22986 TTTAGCCCCGACGTATCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCC 23045 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8093 TTTAGCCCCGACATAGCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCC 8034 Query 23046 CGGCTGTATGCGCGAGGTTACCGACTGCGGCCTGAGTTTTTTAAATGGCGGAAAATCGTG 23105 |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct 8033 CGGCTGTATGCGCGAGGTTACCGACTGCGGCCTGAGTTTTTTAAGTGACGTAAAATCGTG 7974 Query 23106 TTGAGGCCAACGCCCATAATGCGGGCGGTTGCCCGGCATCCAACGCCATTCATGGCCATA 23165 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7973 TTGAGGCCAACGCCCATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATA 7914 Query 23166 TCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCAT 23225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7913 TCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCAT 7854 Query 23226 GTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGC 23285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7853 GTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGC 7794 Query 23286 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCA 23345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7793 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCA 7734 Query 23346 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC 23393 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7733 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC 7686 >seq53858 Length=26476 Score = 522 bits (578), Expect = 1e-143 Identities = 292/294 (99%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 22626 GGTAATGACTCAAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC 22685 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26183 GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC 26242 Query 22686 ATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTG 22745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26243 ATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTG 26302 Query 22746 CCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAG 22805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26303 CCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAG 26362 Query 22806 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC 22865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26363 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC 26422 Query 22866 AAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATCGTGCGTTCACC 22919 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 26423 AAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACC 26476 >seq519200 Length=4173 Score = 109 bits (120), Expect = 3e-19 Identities = 60/60 (100%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 23308 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACAC 23367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2538 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACAC 2479 >seq2652797 Length=614 Score = 91.5 bits (100), Expect = 8e-14 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 8259 GCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGC 8308 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 565 GCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGC 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 265340834716095