Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq1344 425 2e-114 >seq1344 Length=81602 Score = 425 bits (470), Expect = 2e-114 Identities = 785/1141 (69%), Gaps = 14/1141 (1%) Strand=Plus/Plus Query 27456 GCTTCATTAT-TACTCCTCCCAACGTGGCTTAATCAAATCATCAAAAATTTCCTGGCAAA 27514 |||||||||| || || ||||| ||||| ||||||| | ||| |||||||| | ||| | Sbjct 1118 GCTTCATTATCTAATC-TCCCAGCGTGGTTTAATCAGACGATCGAAAATTTCATTGCAGA 1176 Query 27515 CAGGCTCCCAAATAGAAACTGCATTTCGCCAGGCGTTAAGTGTTGAGCGCTGATAAGCAG 27574 |||| ||||||||||||| ||||||| |||||| | || ||||| |||| | | Sbjct 1177 CAGGTTCCCAAATAGAAAGAGCATTTCTCCAGGCACCAGTTGAAGAGCGTTGATCAATGG 1236 Query 27575 CCTGCTCAAATACCGTACGCATTTTTATTTGGCCCTTTCCTACTTCATCTGTCACCCTGA 27634 |||| ||||| || || | ||| || || || || || |||||||| || | | | Sbjct 1237 CCTGTTCAAAAACAGTTCTCATCCGGATCTGACCTTTACCAACTTCATCCGTTTCACGCA 1296 Query 27635 CAACTTGACGCAGAACCATCGACCCCCACGTATTTCTTATCTGCTCTTCCATCCAGCGCG 27694 |||| | |||||||| ||||| | || | || ||||| |||||||| | | Sbjct 1297 CAACATTTTTTAGAACCATGCTTCCCCAGGCATCCCGAATTTGCTCCTCCATCCACGGGG 1356 Query 27695 ACTGATTACCAGTAGTCAGGCTGTATTTGGTTAGCAGCAGTCGTACCACCGGCTCGAAAC 27754 ||||| ||| || | |||||||||||| |||| | || || | |||||||| | Sbjct 1357 ACTGAGAGCCATTACTATTGCTGTATTTGGTAAGCAAAATACGAACATCAGGCTCGAACC 1416 Query 27755 CGCCTAAATCAACGGTTTTTAGTAGGTCCAGAAGCATGGTGAAGAACTGCAGAACGGATG 27814 | | ||||||| | || || || || ||||||| ||| |||||||| |||| | Sbjct 1417 CTTTAAGATCAACGTTCTTGAGCAGATCACGAAGCATATCGAAAAACTGCAGTGCGGAGG 1476 Query 27815 AATAATCAAATAGCTCTGCAGGGGTAGCTACGACAATAATATCGGCAGCACAAACAACAT 27874 || ||||| | ||| ||||| || | || | | | ||| |||||||| || |||| Sbjct 1477 TGTAGTCAAACAACTCAGCAGGCGTGGGAACAATCAGCACATCAGCAGCACATACGACAT 1536 Query 27875 TAATCGTCCCTGTTCCGAGGTTAGGAGCGCTATCAATAACGATAATGTCATAGTTATCCC 27934 ||||||| || | || |||||||| ||||| |||||||| || | ||||||| || Sbjct 1537 TAATCGTGCCGATACCCAGGTTAGGCGCGCTGTCAATAACTATGACATCATAGTCATGAG 1596 Query 27935 ATACGGATTCTATAGCAGCCCGTAGCATCAGGTGAGG--CGGATGAGGTAGTTTTCCTTG 27992 || | ||| || || || ||||||||||| || ||| || || ||||| |||| Sbjct 1597 CAACAGTTTCAATGGCCAGTCGGAGCATCAGGTGTGGATCGG-TG-GGCAGTTTACCTT- 1653 Query 27993 GGCGTGGTATT---GCATCAGGTCCGTTTCGATACGGTGAAGCGCCAAGCAGCTGGGGAT 28049 | | ||| ||| | || ||||| |||||||| || |||| ||| || || Sbjct 1654 --CATCAAATTTGCCCATTAACTCAGTTTCAATACGGTGCAGAGCCAGACAGGAAGGAAT 1711 Query 28050 AATGTCCAGACCTGGCCAGCAGGTCGGCTTTATAGCGTATTCCGCATTATCACGCTCACC 28109 |||||| || || |||||||| || |||||||| || || ||| || || || Sbjct 1712 AATGTCAAGCCCCGGCCAGCAAGTGGGCTTTATTGCATAAGTGACATCGTCCTTTTCCCC 1771 Query 28110 AAGGTAAAACGGGAGCAAAGTATCATCGGCGTGAATGTGCAAATCAGGCACATAGCCATG 28169 ||| || || || || | ||| || || || ||||| || | ||| || || | || || Sbjct 1772 AAGATAGAAAGGCAGGAGAGTGTCTTCTGCATGAATATGAAGATCTGGAACCCATCCGTG 1831 Query 28170 ATACATAGAGGCGGTTCCCTGCGGATCATTACCTTCAATGAGTAGAACTCGGTGACCCTG 28229 |||||| ||||| |||||||| || || |||||||| | ||| | ||| || | |||| Sbjct 1832 ATACATTGAGGCTGTTCCCTGGGGGTCGTTACCTTCCACGAGCAAAACACGTAGCCCCTT 1891 Query 28230 TAAGGCTAACCATTGAGCTTCATGTACTGCAGATGAGGTTTTATAAACGCCACCTTTGTG 28289 | || || ||||| ||| || | | |||||||| |||||||| ||||| || Sbjct 1892 CAGAGCCAAATCCTGAGCAAGATGAACAGAAACAGAGGTTTTGTAAACGCCTCCTTTATG 1951 Query 28290 TGACATAACAGCTAAAACGGCTGGATTTTTATCGGCTGGCCGTTG-ATTAGGATTACCGA 28348 | ||| | | || | |||| | || | | ||| | | | | || || | Sbjct 1952 GGCAGCAACCCCGATCACCGGTGGAAATACGTCTTCAGCACGTCGCAATCGCGTT-CCAA 2010 Query 28349 AAATGTTCCGCATATGGCTAATTTGGTCGATGGTATAGCCAGCACGACGTTCGACGCGGC 28408 | | | |||||||| ||||||| || || ||||| ||| |||| | || || || | Sbjct 2011 ACACATCACGCATATGATTAATTTGTTCAATTGTATAACCAACACGTTGCTCAACCCGTC 2070 Query 28409 CACGCAATTCAAAATCAGGTGGCGGTAACCGCCCATTCTTCTCAGCATCTCTAATCGCTT 28468 | || | ||| | ||| || |||||| ||||| ||||| |||||||| || || | Sbjct 2071 CTCGAATTTCCATATCCGGGTGCGGTAGTCGCCCTGCTTTCTCGGCATCTCTGATAGCCT 2130 Query 28469 GCGGTGAAACACCGATTAAATCAGCAACCTCGGTTATCCCCCAGCGACGAGTAATCTTAC 28528 | | ||||| || | |||||| || | || ||| | |||||| || || || || | Sbjct 2131 GAGAAGAAACCCCAACTAAATCCGCTGCTTCACCTATTCTCCAGCGCCGGGTTATTTTCC 2190 Query 28529 GTGCTTCAGGGCTATCATCACCAAATTGCGCTATGGCAATGGCTTGCGTCATCTCTTGTC 28588 ||||| ||||| |||||| ||| || || ||||| || || | |||||| || || | Sbjct 2191 TCGCTTCCGGGCTGTCATCATTAAACTGTGCAATGGCGATAGCCTTCGTCATTTCATGAC 2250 Query 28589 C 28589 | Sbjct 2251 C 2251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144910571539170