Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq416950 517 2e-142 seq1393656 188 1e-43 >seq416950 Length=5269 Score = 517 bits (572), Expect = 2e-142 Identities = 1290/1938 (67%), Gaps = 41/1938 (2%) Strand=Plus/Plus Query 5457 GTCTCGCATTCCACCAGCCAGGTCAGCTGAGGATCTTTTGGGTCAAAAACCAAGCGCCCG 5516 ||||| ||||| |||| ||| || | || | |||||| |||||||| | ||| Sbjct 782 GTCTCACATTCAACCAACCATGTAATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCT 841 Query 5517 CCGttttttttGATGCGCTTCCTACCTCGAGTCTCCATGAGGCGGTGCCCGCGTTCGGTG 5576 || ||||| || ||||| | |||||| ||||||||| |||||||| |||||| Sbjct 842 CCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTC 901 Query 5577 ACGAAGAGGCTGTCGGTGTCTCCGTAGACGGAGGTCAGGGCGCGCTCTTCCAGGGGGGTC 5636 || || | |||||| ||||| |||||||| || | | | | | || || | Sbjct 902 ACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTT 961 Query 5637 CCGCGGTCCTCGGCGTAGAGAAACTCGCACCACTCTGACATAAACGCCCGGGTCCAGGCT 5696 || | ||| |||||||| | ||| || |||||| |||| ||| | | |||||||| Sbjct 962 CCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGACACAAATACTCTAGTCCAGGCC 1021 Query 5697 AGGACGAATGAGGCGATGTGGGAAGGGTACCGGTCGTTATCGATGAGGGGGTCGGTTTTT 5756 | || || || || |||||||||| ||||| || ||| || || | || | | ||| Sbjct 1022 AAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTT 1081 Query 5757 TCCAAGGTGTGCAAGCACATGTCCCCCTCGTCCGCTTCCAAAAATGTGATTGGCTTGTAG 5816 || || ||||| ||||| ||||| | || || | ||| ||||| ||||||||||| || Sbjct 1082 TCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATAC 1141 Query 5817 GTGTAGGTCACGTGATCCTGTCCTTCCGCGGGGGTATAAAAGGGGGCGTTTCCCCCCTCC 5876 | || ||||||||| || || || |||||||||| ||| || | | | Sbjct 1142 TTATATGTCACGTGA--CTATCTTT------GGGTATAAAAAGGGT-GTGCTCTTCGTTT 1192 Query 5877 TCGTCACTCTCTTCCGGTTCGCTGTCGCCAAAGGCCAGCTGTTGGGGTACGTATACGCGG 5936 || ||||| || || ||| || |||| || | |||| || | |||| Sbjct 1193 TCATCACTTTCATCTAACTCG-----GCAGAAGGT--GCAGGTGGG-TAAGC-TACGACA 1243 Query 5937 GTGAAGGCGGGCATGACCTGGGCGCTGAGGTTGTCAGTTTCTATATATGAGGAAGATTTG 5996 || | ||||| | | || || | ||||||||||||||| |||| ||||||||| Sbjct 1244 ---AATTCTGGCATAATTTCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTG 1300 Query 5997 ATGGCGAGCGCCCCCGTGGAGATGCCCTT-GAGGTGCTCGGGGCCCATTTGGTCAGAAAA 6055 |||| | || ||| |||| || || | ||| || | | |||||| ||||| Sbjct 1301 ATGGAAAAGTTACCTCTGGCGATGGTTTTTGACGCGCT-GGCTTCTAGTTGGTCTGAAAA 1359 Query 6056 CACAATCTGTCGGTTGTCAAGCTTGGTTGCAAAAGACCCGTAGAGGGCGTTGGAGAGCAA 6115 |||||| | | |||||| | || || ||||| || || | ||||||||| || | Sbjct 1360 CACAATTTTTTTGTTGTCCAATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAG 1419 Query 6116 CTTGGCGATGGAGCGCTGGGTTTGGtttttttCCCGGTCGGCTTTTTCCTTGGCTGCGAT 6175 ||| || ||| ||| ||||||||| ||||| ||| |||||||| |||||| |||| Sbjct 1420 CTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGAT 1479 Query 6176 GTTGAGCTGGACGTACTCCCTGGCCACGCACTTCCAGCCGGGAAAAACGGCCGTGCGCTC 6235 ||| ||||| ||||| || |||||||||||||||| | || || | || || | || Sbjct 1480 GTTTAGCTGCACGTATTCTTTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTC 1539 Query 6236 GTCCGGCACCAGCCTTACGCTCCATCCGCGGTTGTGCAGGGTGATGACGTCGATGCTGGT 6295 ||| || | | | || |||||| | |||||||| || || | ||| || || Sbjct 1540 GTCTGGAAGAATGCGCACTGCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGT 1599 Query 6296 GGCCACCTCTCCGCGCAGGGGCTCGTTGGTCCAGCAGAGGCGACCGCCCTTGCGAGAGCA 6355 || || ||||| |||| |||||||| |||||||| || | ||||| || | ||||| Sbjct 1600 AGCTACTTCTCCTCGCAAAGGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCA 1659 Query 6356 GAAGGGTGGCAGGGGGTCAAGCAGGCGCTCGTCCGGGGGGTCGGCGTCGATGGTAAAGAT 6415 || || ||||| ||||| | |||||| || || || ||||||||||| || || Sbjct 1660 AAACGGAGGCAGTTCATCAAGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAAT 1719 Query 6416 GGCGGGCAGGAGGTGTTTGTCAAAGTAGTCGATCTGATGCCCGGGGCGACGCAGGGCGGT 6475 | | || || || | |||||| ||||| || | ||| | | || | | Sbjct 1720 GCCTGGAAGAAGACACTCGTCAAAATAGTCAATTTTTTGCTCTAAG-TTTTCA---AGCT 1775 Query 6476 TTC----CCAGTCCCGCACCGCCAAGGCGCGCTCGTAGGGACTGAGGGGGGCGCCCCAGG 6531 ||| ||| || | | || ||||| | || || ||| | | || || | || Sbjct 1776 TTCTGATCCATTCTGTCGCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGG 1835 Query 6532 GCATGGGATGCGTCAGGGCCGAGGCGTACATGCCGCAGATGTCGTAGACGTAAAGGGGCT 6591 | | |||||||| || || ||| ||||||||||||||||| || || |||| |||| Sbjct 1836 GAAAAGGATGCGTTAGAGCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCT 1895 Query 6592 CCTCCAGGACGCCGAGGTAGGTTGGGTAGCAGCGCCCCCCGCGGATGCTGGCCCGTACGT 6651 |||| || ||| | || || || |||||||| || || |||||||| || |||| Sbjct 1896 GTTCCATGATGCCAATATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGT 1955 Query 6652 AGTCGTAGAGCTCGTGCGAGGGGGC-CAGAAGGTGGCGGCTGAGGTGAGCGCGCTGGGGC 6710 |||| || | || || || || || | || | | || | || || | ||| Sbjct 1956 AGTCATACATTTCATGAGATGGTGCTAATAAAACGTTGTCT-AAGTTTGCTTTATTTGGC 2014 Query 6711 TTTTCATCTCGGAAGAGGATCTGCCTGAAGATGGCGTGGGAGTTGGAGGAGATGGTGGGC 6770 | | |||| | | | || ||| | || || || || ||||| ||| || ||||| Sbjct 2015 CTAACTTCTCTGTATAATATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGT 2074 Query 6771 CGCTGAAAAATGTTGAAGCGGGCGTCGGGCAGACCCACGGCCTCGCCGATAAAGTGGGCG 6830 | ||||||||||| || || || || | ||| | ||||||| | Sbjct 2075 CTTTGAAAAATGTTAAATGAAGCATCAGGTAAGTTCACTTGAGAAGCAATAAAGTTTTTG 2134 Query 6831 TAGGACTCTTGCAGCTTTTCCACCAGGGAGGCGGTGACCAGCACGTCCAGAGCGCAGTAG 6890 || || ||||| || || | || |||| | || || | |||||| | | || ||| Sbjct 2135 TAAGATTCTTGGAGTTTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAG 2194 Query 6891 TCCAGGGTTTCCCGCACGATGTCATAATGCTCTTCCtttttttCCTTCCAGAGGTCTCGG 6950 | ||| |||| | | | ||||| ||| | | | |||||||| |||| || | | Sbjct 2195 TGCAGCGTTTGCTGGATTATGTCGTAAGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTG 2254 Query 6951 TTGAAGAGATACTCTTCGCGGTCTTTCCAGTACTCTT-GGAGAGGAAACCCGTCTTCGTC 7009 |||| |||||||||||| | ||||||||| |||| || ||||| || || || || Sbjct 2255 TTGAGTTGATACTCTTCGCTGGATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATC 2313 Query 7010 TCCACGGTAAGAGCCCAACATGTAAAACTGGTTGACGGCCTGATAGGGACAGCATCCCTT 7069 | ||||||| || | | || || | || || || | || ||||||| ||| || Sbjct 2314 TTGTTGGTAAGACCCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTT 2373 Query 7070 CTCCACGGGCAGCGAGTAGGCCAGGGCGGCCTTGCGCAGGGAGGTGTGAGTCAGGGCAAA 7129 || || |||||| ||| ||| || || || | | | ||||| ||||| ||||| Sbjct 2374 TTCTACAGGCAGCTCGTAAGCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAA 2433 Query 7130 GGTGTCGCGGACCATGACTTTTACAAACTGGTACTTAAAGTCC-CGGTCGTCGCACATGC 7188 ||||| | ||||| | ||| |||||||||||||| |||| ||| || | | | | Sbjct 2434 AGTGTCTCTTACCATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGT-GAGCTTTC 2492 Query 7189 CTCGCTCCCAGTCTGAGTAGTCTGTGCGCTTTTTGTGCTTGGGGTTAGGCAGGGAGTAGG 7248 | | |||||| || | | | ||| | || |||| || ||| || ||||| | | | | | Sbjct 2493 CACACTCCCAATCGGCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAG 2552 Query 7249 TGACGTCGTTAAAGAGGATTTTGCCGCATCTGGGCATAAAGTTGCGAGAGATTCTGAAGG 7308 | ||| || || || ||||| ||| ||| |||||||| || | | ||| |||| | Sbjct 2553 AAATGTCATTGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAG 2612 Query 7309 --GGCCGGGCACCTCCGAGCGGTTGTTGATGACTTGGGCCGCCAGGAGAATTTCGTCGAA 7366 ||| | || |||| | ||||| |||||||| || |||| | || || || || Sbjct 2613 CAGGC--AGAACATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAA 2670 Query 7367 GCCGTTGATGTTGTGCCC 7384 ||| ||||||||| || Sbjct 2671 ACCGCAGATGTTGTGGCC 2688 Score = 188 bits (208), Expect = 1e-43 Identities = 391/572 (68%), Gaps = 15/572 (3%) Strand=Plus/Plus Query 8529 TGAACCTGAAAGAGAGTTCGACAGAATCAATCTCGGCATCGTTAACCGCGGCCTGGCGCA 8588 ||||||||||||| | ||| | ||| ||||| || || || ||||| || | || | Sbjct 3746 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 3805 Query 8589 GGATTTCGGCCACGTCCCCGGAGTTGTCTTGATACGCGATTTCTGCCATGAACTGGTCGA 8648 || || |||||| ||| ||| || ||||| || ||||||||||| ||||| || | Sbjct 3806 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 3865 Query 8649 TTTCCTCTTCCTGC---AAGTCTCCGTGACCGGCGCGTTCGACGGTGGCCGCGAGATCGT 8705 | |||||||||| || ||||| || || | || || ||||| || | || Sbjct 3866 T---CTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAA 3922 Query 8706 TGGAGATGCGGCCCATGA-GCTGGGAAAAGGCATTGATGCCGACCT-CGTTCCACACTCG 8763 || ||||| ||||| | | ||||| | || | || | | | |||||||||| Sbjct 3923 TGCTAATGCGAGACATGATGTTACTAAAAGCC--TGTTCCCCATTTTCATTCCACACTCT 3980 Query 8764 GCTGTACACCACCTCTCCGTGAACGTCGCGGGCGCGCATGACCACCTGGGCGAGATTGAG 8823 ||||||||| | | ||| | ||| | ||| | ||| || ||||| || ||||| || Sbjct 3981 GCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAG 4040 Query 8824 TTCCACGTGGCGGGCGAAAACCGGATAGTTTCGG--AGGCGCTGATACAAATAGTTGAGG 8881 ||| | | | |||| ||| || | | | | |||| || ||||| || Sbjct 4041 CATCACATATCTCCC-AAAAGGGGA-AGATACCCTAATTTGGTGATTTAAGTAGTTTAGT 4098 Query 8882 GTGGTGGCAGCGTGTTCGGCCACGAAAAAATACATGATCCAGCGGCGGAGGGTTAGCTCG 8941 ||||| ||| |||||| ||||| ||||| |||| | |||||| |||| ||| || Sbjct 4099 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 4158 Query 8942 TTGATGTCCCCCAGCGCCTCCAGGCGTTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTG 9001 || ||||| || |||||||||| || | || |||| || || | || || ||||| Sbjct 4159 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 4218 Query 9002 AAAAATTGGCTGTTCCTGGCCGAGACAGTGAGCTCTTCTTCCAAGAGCCGAATGAGATCC 9061 ||||| || ||| || || || ||||||||||||||||| || | |||||| || Sbjct 4219 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTCT 4278 Query 9062 GCCACGGTGGCCCTGACTTCGCGCTCGAAAGC 9093 ||||| | || ||| ||||||| || ||||| Sbjct 4279 GCCACAGCGGTCCTAACTTCGCTTTC-AAAGC 4309 >seq1393656 Length=1543 Score = 188 bits (208), Expect = 1e-43 Identities = 391/572 (68%), Gaps = 15/572 (3%) Strand=Plus/Plus Query 8529 TGAACCTGAAAGAGAGTTCGACAGAATCAATCTCGGCATCGTTAACCGCGGCCTGGCGCA 8588 ||||||||||||| | ||| | ||| ||||| || || || ||||| || | || | Sbjct 54 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 113 Query 8589 GGATTTCGGCCACGTCCCCGGAGTTGTCTTGATACGCGATTTCTGCCATGAACTGGTCGA 8648 || || |||||| ||| ||| || ||||| || ||||||||||| ||||| || | Sbjct 114 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 173 Query 8649 TTTCCTCTTCCTGC---AAGTCTCCGTGACCGGCGCGTTCGACGGTGGCCGCGAGATCGT 8705 | |||||||||| || ||||| || || | || || ||||| || | || Sbjct 174 T---CTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAA 230 Query 8706 TGGAGATGCGGCCCATGA-GCTGGGAAAAGGCATTGATGCCGACCT-CGTTCCACACTCG 8763 || ||||| ||||| | | ||||| | || | || | | | |||||||||| Sbjct 231 TGCTAATGCGAGACATGATGTTACTAAAAGCC--TGTTCCCCATTTTCATTCCACACTCT 288 Query 8764 GCTGTACACCACCTCTCCGTGAACGTCGCGGGCGCGCATGACCACCTGGGCGAGATTGAG 8823 ||||||||| | | ||| | ||| | ||| | ||| || ||||| || ||||| || Sbjct 289 GCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAG 348 Query 8824 TTCCACGTGGCGGGCGAAAACCGGATAGTTTCGG--AGGCGCTGATACAAATAGTTGAGG 8881 ||| | | | |||| ||| || | | | | |||| || ||||| || Sbjct 349 CATCACATATCTCCC-AAAAGGGGA-AGATACCCTAATTTGGTGATTTAAGTAGTTTAGT 406 Query 8882 GTGGTGGCAGCGTGTTCGGCCACGAAAAAATACATGATCCAGCGGCGGAGGGTTAGCTCG 8941 ||||| ||| |||||| ||||| ||||| |||| | |||||| |||| ||| || Sbjct 407 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 466 Query 8942 TTGATGTCCCCCAGCGCCTCCAGGCGTTCCATGGCCTCGTAGAAGTCCACGGCGAAGTTG 9001 || ||||| || |||||||||| || | || |||| || || | || || ||||| Sbjct 467 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 526 Query 9002 AAAAATTGGCTGTTCCTGGCCGAGACAGTGAGCTCTTCTTCCAAGAGCCGAATGAGATCC 9061 ||||| || ||| || || || ||||||||||||||||| || | |||||| || Sbjct 527 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTCT 586 Query 9062 GCCACGGTGGCCCTGACTTCGCGCTCGAAAGC 9093 ||||| | || ||| ||||||| || ||||| Sbjct 587 GCCACAGCGGTCCTAACTTCGCTTTC-AAAGC 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96136780854720