Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq416950 461 1e-125 seq1393656 131 3e-26 >seq416950 Length=5269 Score = 461 bits (510), Expect = 1e-125 Identities = 1286/1957 (66%), Gaps = 37/1957 (2%) Strand=Plus/Plus Query 5123 GTCTCGCACTCCACCAGCCACGTGA--GCTCGGGTTTAGCGGGATCAAAAACCAAGTTGC 5180 ||||| || || |||| ||| || | | | || ||| ||||||||||| | || | Sbjct 782 GTCTCACATTCAACCAACCATGTAATAGATGGGTTTTTT--GGATCAAAAACTAGCTTCC 839 Query 5181 CTCCAttttttttGATGCGTTTCTTACCTTGCGTCTCCATGAGTCTGTGTCCCGCTTCCG 5240 |||||||||| || ||||| | |||||| ||||||||| | ||| ||| |||| | Sbjct 840 CTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGG 899 Query 5241 TGACAAAAAGGCTGTCGGTATCCCCGTAGACCGACTTGAGGGGGCGATCTTCCAAAGGTG 5300 | ||||| | |||||| || ||||||||||| || || | | | | | || Sbjct 900 TCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATAGTTTTTTGATGTAGTGGCT 959 Query 5301 TTCCGAGGTCTTCCGCGTACAGGAACTGGGACCACTCCGAGACAAAGGCTCGGGTCCAGG 5360 |||| |||||| ||||| | || | | |||||| || ||||| ||| ||||||| Sbjct 960 TTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGACACAAATACTCTAGTCCAGG 1019 Query 5361 CTAACACGAAGGAGGCGATCTGCGAGGGGTATCTGTCGTTTTCAATGAGGGGGTCCACCT 5420 | || || || || || || || || | ||| |||| |||||| || | || | Sbjct 1020 CCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGT 1079 Query 5421 TTTCCAGGGTGTGCAGACACAGGTCGTCCTCCTCCGCGTCCACGAAGGTGATTGGCTTGT 5480 |||| | ||||| | || | ||| || || || | || | || ||||||||||| | Sbjct 1080 TTTCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCTAAAAACGTGATTGGCTTAT 1139 Query 5481 AAGTGTAGGTCACGTGACCCGCAcccccccAAGGGGTATAAAAGGGGGCGTGCCCACTCT 5540 | | || |||||||||| | |||||||||| ||| |||| | | Sbjct 1140 ACTTATATGTCACGTGACTATCTTT--------GGGTATAAAAAGGGT-GTGCTCTTCGT 1190 Query 5541 CCCCGTCACTTTCTTCCGCATCGCTGTGGACCAGAGCCAGCTGTTCGGGTGAGTAGGCCC 5600 | |||||||| || ||| |||| || || | |||| ||| || Sbjct 1191 TTTCATCACTTTCATCTAACTCGG-------CAGA---AGGTG--CAGGTGGGTAAGCTA 1238 Query 5601 TCTCAAAAGCCGGCATGATTTCGGCGCTCAAGTTGTCAGTTTCTACAAACGAGGTGGATT 5660 |||| | ||||| ||||| || || |||||||||||||||| || || | |||| Sbjct 1239 CGACAAATTCTGGCATAATTTCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATT 1298 Query 5661 TGATATTCACGTGCCCCGCGGCGATGCTTTTGATGGTGGAGGGGTCCATCTGATCAGAAA 5720 |||| | || || ||||||| |||| | | || || | || || |||| Sbjct 1299 TGATGGAAAAGTTACCTCTGGCGATGGTTTTTGACGCGCTGGCTTCTAGTTGGTCTGAAA 1358 Query 5721 ACACGATCTTTTTATTGTCAAGTTTGGTGGCGAAAGACCCGTAGAGGGCGTTGGAAAGCA 5780 |||| || ||||| ||||| | ||| ||||| || || || | |||||||||||| | Sbjct 1359 ACACAATTTTTTTGTTGTCCAATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTA 1418 Query 5781 ACTTGGCGATGGAGCGCAGGGTCTGATTTTTCTCCCGATCGGCCCTCTCCTTGGCGGCGA 5840 ||| || ||| |||| ||| || || || || || || | || ||||| ||| Sbjct 1419 GCTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGA 1478 Query 5841 TGTTGAGTTGCACGTACTCGCGGGCCACGCACCGCCACTCGGGGAACACGGCGGTGCGCT 5900 |||| || |||||||| || |||||||||| |||||| ||||| | || || | | Sbjct 1479 TGTTTAGCTGCACGTATTCTTTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTT 1538 Query 5901 CGTCGGGCAGGATGCGCACGCGCCAGCCGCGGTTGTGCAGGGTGATGAGGTCCACGCTGG 5960 |||| || || |||||||| ||| || | |||||||| || || | ||| | | Sbjct 1539 CGTCTGGAAGAATGCGCACTGCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAG 1598 Query 5961 TGGCCACCTCCCCGCGGAGGGGCTCGTTGGTCCAACACAATCGCCCCCCTTTTCTGGAGC 6020 | || || || || || | |||||||| ||||| |||| | || ||||||||||||| Sbjct 1599 TAGCTACTTCTCCTCGCAAAGGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGC 1658 Query 6021 AGAACGGAGGCAGGGGATCTAGCAAGTTGGCGGGCGGGGGGTCGGCGTCGATGGTAAATA 6080 | ||||||||||| ||| || || || || || || ||||||||||| || | Sbjct 1659 AAAACGGAGGCAGTTCATCAAGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAA 1718 Query 6081 TGCCGGGTAGCAGAATTTTATTAAAATAATCGATTTCGGTGTCCGTGTCTTGCAACGCGT 6140 |||| || || ||| | | |||||| || |||| || || || ||| | Sbjct 1719 TGCCTGGAAGAAGACACTCGTCAAAATAGTCAATTTTTTGCTCTAAGTTTT-CAAGCTTT 1777 Query 6141 CTTCCCACTTCT-TCACCGCCAGGGCCCTTTCGTAGGGATTCAGGGGCGGTCCCCAGGGC 6199 || | |||| || | || | ||| ||||| || ||||| | ||| | || | ||| Sbjct 1778 CTGATCCATTCTGTCGCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGA 1837 Query 6200 ATGGGGTGGGTCAGGGCCGAGGCGTACATGCCGCAGATGTCGTACACGTACAGGGGCTCC 6259 | || || || || || ||| ||||||||||||||||| ||||| || | |||| Sbjct 1838 AAAGGATGCGTTAGAGCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGT 1897 Query 6260 CTCAACACCCCGATGTAAGTGGGGTAACAGCGCCCCCCGCGGATGCTGGCTCGCACGTAG 6319 || | || || |||||||| || ||||| || || |||||||| || |||||| Sbjct 1898 TCCATGATGCCAATATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAG 1957 Query 6320 TCGTACATCTCGTGAGAGGGAGCCATGAGCCCGTCTCCCAAGTGGGTCTTGTGGGGTTTT 6379 || ||||| || ||||| || || | | ||| | |||| | || | || | Sbjct 1958 TCATACATTTCATGAGATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCTA 2017 Query 6380 TCGGCCCGGTAGAGGATCTGCCTGAAGATGGCGTGGGAGTTGGAAGAGATAGTGGGGCGT 6439 | | | ||| | || ||| | || || || || ||||| || |||||||| | | Sbjct 2018 ACTTCTCTGTATAATATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTT 2077 Query 6440 TGGAAGACGTTAAA-GTTGGCTCCGGGCAGTCCCACGGAGTCTTGGATGAACTGGGCGTA 6498 || || | |||||| | | || || ||| | ||| || || | ||| Sbjct 2078 TGAAAAATGTTAAATGAAGCATCAGGTAAGTTCACTTGAG-AAGCAATAAAGTTTTTGTA 2136 Query 6499 GGATTCCCGGAGCTTGTCCACCAGGGCTGCGGTTACCAGCACGTCGAGAGCGCAGTAGTC 6558 ||||| |||| |||| || ||||| | || || | |||||| | | || |||| Sbjct 2137 AGATTCTTGGAGTTTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTG 2196 Query 6559 CAACGTCTCGCGGACCAGGTTGTAGGCCGTCTCTTGTTTTTTCTC-CCACAGTTCGCGAT 6617 || ||| | ||| | || ||| ||| | | | ||||||||| |||||| | | Sbjct 2197 CAGCGTTTGCTGGATTATGTCGTAAGCCCCCACGT-TTTTTTCTCTCCACAGAGCCTTGT 2255 Query 6618 TGAGGAGGTATTCCTCGCGGTCTTTCCAGTACTCTTCGGC-GGGAAATCCTTTTTCGTCC 6676 |||| | || || |||| | ||||||||| |||| ||| ||||| || | || || Sbjct 2256 TGAGTTGATACTCTTCGCTGGATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCT 2314 Query 6677 GCTCGGTAAGAACCTAACATGTAAAATTCGTTCACGGCTTTGTATGGACAACAGCCTTTT 6736 | ||||||| |||| | || ||||| || || |||| ||| ||||| | |||||| Sbjct 2315 TGTTGGTAAGACCCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTT 2374 Query 6737 TCTACCGGCAGGGCGTACGCTTGAGCGGCCTTTCTGAGAGAGGTGTGGGTGAGGGCGAAG 6796 ||||| ||||| |||| || ||| || ||||| | |||||||| || || || Sbjct 2375 TCTACAGGCAGCTCGTAAGCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAA 2434 Query 6797 GTGTCCCGCACCATCACTTTCAGGTACTGATGTTTGAAGTCCGTGTCGTCGCAGGCGCCC 6856 ||||| | ||||| | ||| | |||| | ||| ||||| | | | || Sbjct 2435 GTGTCTCTTACCATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTCCA 2494 Query 6857 TGTTCCCACAGCGTGAAGTCGGTGCGCTTTTTCTGCCTGGGATTGGGGAGGGCGAATGTG 6916 ||||| | ||| || | || |||| | | | ||||| || | | || | Sbjct 2495 CACTCCCAATCGGCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAA 2554 Query 6917 ACGTCGTTAAAGAGGATTTTCCCGGCGCGGGGCATGAAGTTGCGAGAGATCCTGAAGGGT 6976 | ||| || || || ||||| ||| | ||||| || || | | || |||| | Sbjct 2555 ATGTCATTGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAG-- 2612 Query 6977 CCGG--GCACGTCCGAGCGGTTGTTGATGACTTGCGCCGCCAGGACGATCTCGTCGAAGC 7034 | || | || |||| | ||||| ||||||||||| |||| |||||||| || || | Sbjct 2613 CAGGCAGAACATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAAC 2672 Query 7035 CGTTGATGTTGTGGCCCACGATGTAAAGTTCGATAAA 7071 || |||||||||||| | | |||| ||| ||||| Sbjct 2673 CGCAGATGTTGTGGCCAATTACATAAATTTCAATAAA 2709 Score = 131 bits (144), Expect = 3e-26 Identities = 345/523 (66%), Gaps = 18/523 (3%) Strand=Plus/Plus Query 8242 CTGAACCTGAAAGAGAGTTCCACAGAATCAATGTCTGCATCGTTAACGGCGGCCTGCCTG 8301 |||||||||||||| | ||||| ||| ||||||||||| || ||||| || | ||| | Sbjct 3745 CTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTT 3804 Query 8302 AGGATCTCCTGTACGTCGCCCGAGTTGTCTTGATAGGCGATCTCGGCCATGAACTGCTCC 8361 | ||||| ||||| || ||| || ||||| || || || ||||| |||||||| Sbjct 3805 AAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCA 3864 Query 8362 ACTTCTTCCTCGCGGAGGTCGCCGTGGCCCGCTCGCTCCACGGTGGCGGCCAGGTCGTTG 8421 | ||||||| | || || || |||| ||| || ||||| |||| ||| || Sbjct 3865 ATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATG 3924 Query 8422 GAGATGCGACGCATGA-GTTGAGAGAAGGC-GTTGAGGCCGTTCTCGTTCCACACGCGGC 8479 |||||| ||||| ||| | ||| | ||| || || || |||||||| | || Sbjct 3925 CTAATGCGAGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGC 3982 Query 8480 TGTACACCACGTTTCCGAAGGAGTCGCGCGCTCGCATGACCACCTGGGCCACGTTGAGTT 8539 ||||||| | | ||| || | |||| ||| || ||||| |||| || || Sbjct 3983 TGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCA 4042 Query 8540 CCACGTGGC-------GGGCGAAGACGGCGTAGTTTCTGAGGCGCTGGAAGAGGTAGTTG 8592 ||| | | || ||||| | || ||| || | | || |||||| Sbjct 4043 TCACATATCTCCCAAAAGGGGAAGATACCCTAATTT----GGTGATTTAA---GTAGTTT 4095 Query 8593 AGCGTGGTGGCGATGTGCTCGCAGACGAAGAAGTACATGATCCAGCGCCGCAGGGTCATC 8652 || ||||| || ||||| || || || ||| |||| | |||||| | || || | Sbjct 4096 AGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTT 4155 Query 8653 TCGTTGATGTCTCCGATGGCTTCGAGACGCTCCATGGCCTCGTAGAAGTCGACGGCGAAG 8712 || || ||||| || | || || | ||||| || |||| || || | || || ||| Sbjct 4156 TCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAG 4215 Query 8713 TTGAAAAATTGGGAGTTGCGGGCGGCCACCGTGAGTTCTTCTT 8755 || ||||| || ||| | || | ||| ||||| ||||||| Sbjct 4216 TTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 4258 >seq1393656 Length=1543 Score = 131 bits (144), Expect = 3e-26 Identities = 345/523 (66%), Gaps = 18/523 (3%) Strand=Plus/Plus Query 8242 CTGAACCTGAAAGAGAGTTCCACAGAATCAATGTCTGCATCGTTAACGGCGGCCTGCCTG 8301 |||||||||||||| | ||||| ||| ||||||||||| || ||||| || | ||| | Sbjct 53 CTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTT 112 Query 8302 AGGATCTCCTGTACGTCGCCCGAGTTGTCTTGATAGGCGATCTCGGCCATGAACTGCTCC 8361 | ||||| ||||| || ||| || ||||| || || || ||||| |||||||| Sbjct 113 AAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCA 172 Query 8362 ACTTCTTCCTCGCGGAGGTCGCCGTGGCCCGCTCGCTCCACGGTGGCGGCCAGGTCGTTG 8421 | ||||||| | || || || |||| ||| || ||||| |||| ||| || Sbjct 173 ATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATG 232 Query 8422 GAGATGCGACGCATGA-GTTGAGAGAAGGC-GTTGAGGCCGTTCTCGTTCCACACGCGGC 8479 |||||| ||||| ||| | ||| | ||| || || || |||||||| | || Sbjct 233 CTAATGCGAGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGC 290 Query 8480 TGTACACCACGTTTCCGAAGGAGTCGCGCGCTCGCATGACCACCTGGGCCACGTTGAGTT 8539 ||||||| | | ||| || | |||| ||| || ||||| |||| || || Sbjct 291 TGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCA 350 Query 8540 CCACGTGGC-------GGGCGAAGACGGCGTAGTTTCTGAGGCGCTGGAAGAGGTAGTTG 8592 ||| | | || ||||| | || ||| || | | || |||||| Sbjct 351 TCACATATCTCCCAAAAGGGGAAGATACCCTAATTT----GGTGATTTAA---GTAGTTT 403 Query 8593 AGCGTGGTGGCGATGTGCTCGCAGACGAAGAAGTACATGATCCAGCGCCGCAGGGTCATC 8652 || ||||| || ||||| || || || ||| |||| | |||||| | || || | Sbjct 404 AGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTT 463 Query 8653 TCGTTGATGTCTCCGATGGCTTCGAGACGCTCCATGGCCTCGTAGAAGTCGACGGCGAAG 8712 || || ||||| || | || || | ||||| || |||| || || | || || ||| Sbjct 464 TCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAG 523 Query 8713 TTGAAAAATTGGGAGTTGCGGGCGGCCACCGTGAGTTCTTCTT 8755 || ||||| || ||| | || | ||| ||||| ||||||| Sbjct 524 TTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96710094211080