Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq17409 134 5e-27 >seq17409 Length=41676 Score = 134 bits (148), Expect = 5e-27 Identities = 300/445 (67%), Gaps = 14/445 (3%) Strand=Plus/Plus Query 7927 GACGAGTGTTCGATGGTCGACATGCAGGTCGGTCAAGACCTCCTCTCCTTCGACGTCCCC 7986 ||||| || |||||||||||| | | |||| | ||||| | || ||||| |||| Sbjct 36026 GACGAATGCTCGATGGTCGACGCGGAACTCGGCCGCGACCTGATGTCGTTCGATTGCCCC 36085 Query 7987 ATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGCTTCTTCACG 8046 | || ||||| ||||| ||||| ||| | ||||| || ||| || ||||| ||||| Sbjct 36086 TTGCTGGTGCTGGGCGATCCGGCGCAGTTGCCGCCGATCCAGGGCGGCGGCTTTTTCACC 36145 Query 8047 GAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGACAACCCCATC 8106 || ||| ||||||| |||||| || || | ||||| ||||| ||||| |||||||| Sbjct 36146 GATGCCGAGCCGGATGCGATGCTCACCGAAGTGCACCGTCAGGCGCAGGACGACCCCATC 36205 Query 8107 ATCGAGATGGCGACCCGCGTCCGCGAGGACAGAGGTCTGCCCCTGGGCTCCTATGGAGA- 8165 | |||| ||| || ||||||| | | |||| || ||| ||| || || Sbjct 36206 GTGCGGATGTCGATGGCGGTGCGCGAGGGCCGCAGTCTCGATCTCGGCACCTTCGGCGAA 36265 Query 8166 --CTCGGCCGTGCACCGATTTGGGACGC---CAATGGAGGACATCG-CACGTCGAGCCGA 8219 | || ||||| || | ||||| | || |||| || || | | || || Sbjct 36266 AGCGAGGTCGTGCGCC-----GCGACGCGCTCGAT-CCGGACCGCGTCATG-GGCGCTGA 36318 Query 8220 CCAGCTTATATGCGGCCGCAACAAGACGCGTCGAGCGGCGAATAAGAGGATCCGCCAGTT 8279 ||| || | |||||||||||| ||||| || ||| || | | | | || ||| Sbjct 36319 TCAGGTTCTGGTCGGCCGCAACAACACGCGGCGCGCGTACAACATGCGCGTTCGGCAGAA 36378 Query 8280 CAAGGGCTTCGAGGGAGACCTCCCGGTGGTCGGCGACCGGCTCGTCTGCCTGTCCAATGA 8339 ||||| |||||| | ||||||| || |||| ||| ||||||||| ||| | Sbjct 36379 GCAGGGCATCGAGGATCCGTTGCCGGTGGCCGACGACAAGCTGGTCTGCCTGCGCAACAA 36438 Query 8340 CCACGAGGAGGGCCTGCTCAACGGC 8364 || | || ||| ||| |||||||| Sbjct 36439 CCGCAAGAAGGCGCTGTTCAACGGC 36463 Score = 86.0 bits (94), Expect = 2e-12 Identities = 122/171 (71%), Gaps = 3/171 (2%) Strand=Plus/Plus Query 7537 CCCATATTCCGGCTCTTCGGCTACGCGGGGACGGGCAAGACCACGCTGGCCAAGCACCTG 7596 ||| | |||||||| |||||||| || || || ||||||||||| ||||| ||| | Sbjct 35771 CCCGTGTTCCGGCTGTTCGGCTATGCCGGCACCGGCAAGACCACCCTGGCGCGGCATATT 35830 Query 7597 GCCGAGGGCGTCTCGGGCCGAGTGAAGTTCGCCGCGTACACTGGCAAGGCGGCCCAGGTC 7656 || ||||||||| ||| ||||| | ||| || | ||| |||||||| || | ||| Sbjct 35831 GCGGAGGGCGTCAACGGCACCGTGAAATACGCGGCCTTCACCGGCAAGGCCGCGCTGGTG 35890 Query 7657 CTCAGCGAGAAGGGCTG---CCCGGCCACCACAATACACAAGCTGATCTAC 7704 | || | ||||| || | ||| |||| || || |||||||||| Sbjct 35891 ATGCGCAACAAGGGTTGCGACAACGCCTCCACCATTCATTCGCTGATCTAC 35941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 178769783879490