Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq256579 86.0 6e-12 seq39000 84.2 2e-11 >seq256579 Length=8500 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| |||||||||||||| | ||| ||||| || || | ||||||||||| ||||| Sbjct 855 ACAAGCAAAATCACAATGAAGACCCTCATCTCTTGAAATAAGCTCATTAGAAAAAGTTAA 796 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT 21583 ||| |||||||| || | || || |||||||||| || | |||| ||| Sbjct 795 ACCTGGCATTAAGCCCCGTTTCTTCAACCAAAATA-TGGCACAAAAGCT 748 >seq39000 Length=31331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540 |||||||||||| || ||||| | || | ||||| ||||| |||||||| | Sbjct 29505 AAAATCACAATGAAATATCTCATCTCGTAGAATAAGATCATTGGAAAAAGTTAAACCTAG 29564 Query 21541 CATTAATCCTCTCTTT-TTTAACCAAAATATTGACGCAAATGCTCCT-GAAAAGAAAATG 21598 ||||||||| || ||| || |||||||||| |||| |||| || || | |||||||| Sbjct 29565 CATTAATCC-CTATTTCTTCAACCAAAATA-TGACACAAAATCTTCTATAGAAGAAAATA 29622 Query 21599 CCCTCAACGGCAGCAAATGCAA 21620 |||||||| |||||||||| Sbjct 29623 CCCTCAACACATGCAAATGCAA 29644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463726442831800