Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq76002 170 2e-37 seq59164 159 4e-34 seq89744 150 2e-31 seq863644 113 5e-20 seq176824 98.7 1e-15 seq177539 93.3 5e-14 >seq76002 Length=21272 Score = 170 bits (188), Expect = 2e-37 Identities = 605/935 (65%), Gaps = 23/935 (2%) Strand=Plus/Minus Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 ||| |||| |||| ||| ||||| || | | || | | | | ||||| || || Sbjct 19735 CAATGCAATAGATACCAAGTTACAGACTGTTGTTTCTGTTGGACTTGAATATTCAATAAT 19676 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 | ||||| || ||| | | ||||| ||||| | |||||| ||||| || || ||||| Sbjct 19675 ATTTGTGCAGAGGTTAGAAGATTTGATGGTTCCCAGATTTTGCTGATTTCTTTTATTGTT 19616 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 ||| | ||||| | || ||| ||||| | |||| ||||||||||| | || Sbjct 19615 ACAGGTGTCCTTGAAGAGCATGTATGGATTTAATTTTTCTATCTGAGATTCCAGAA---- 19560 Query 63068 TTTCCAGACGACTCGAGCCTTTATTATAG----ATTTGTATCTCCTTTCTCTTTCGT--A 63121 |||| || ||| | | || | | | | | |||| | || | | | Sbjct 19559 ----CAGAAAACCAAAGCTTCTGTTCCTGTACAACCTTTTTTGCCTTACCCTATGGCTCA 19504 Query 63122 TAGTGTAT--ACAATCGTTCGAAC-TCGTCTCCCCAAACATTGTCCAAT-CCAGGACATT 63177 || | || ||| | ||| || || || ||||| || | ||| |||||| || Sbjct 19503 TATTTCATGTACAGTTTTTCAAAAATCTTCAGCCCAA-CACTCAGCAAGACCAGGAGCTT 19445 Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAG 63237 ||| ||||| | ||| ||||| | |||| || | |||||||||||| || | Sbjct 19444 CATTGGGACAAAACAATGACCATGTAGAATTCTCCTATACCCTTTTCATAAAGAGGTCTG 19385 Query 63238 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTT 63297 | | |||||| || | ||| ||||| | || || | ||| || || || ||||| Sbjct 19384 GCACCCAAAGTGCAAAAAACAGATCACGTGTCCTGTTTTCTTCCTTCCCATGGTTCTTCC 19325 Query 63298 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 63357 | | || || ||| | | || ||| | |||||| | || ||||| |||| | | | Sbjct 19324 TCAACTCCAGAAACTCAAAAACATCTGCATGCCATGTCTCTAAGTACATGGAAAAGGCAC 19265 Query 63358 CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 63417 | || ||| ||| || ||||| | |||| || | ||| | || ||||||| Sbjct 19264 CCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGAAAAATCATTGAATACCCTCAACA 19205 Query 63418 TTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAA 63477 |||| | |||||| || ||| | ||||| || || | |||| || ||| | ||||||| Sbjct 19204 TTGGCACAATACCATTGGATGTGCCATTTGTTCCTCGGGTATAACTACCAGTTGCACGAA 19145 Query 63478 TATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 63537 | ||| | | | | ||| | ||| || || ||| |||| | ||| |||| Sbjct 19144 TGTTATGCACTTAAACACCAAGTCCTCCAGCTGATTTTCTTATTACAACACATTCCTTTA 19085 Query 63538 ACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACA 63597 || ||||| || ||||| |||||||||| ||||| || ||||| | ||| | Sbjct 19084 GAGTATCATATATCCCCTCGATGCTATCATATTTCATGCAAACAAGAAAGAAACTACTGA 19025 Query 63598 TTTGGTGACGACTA-GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656 || ||| | | | || | | ||| || | ||||||||||| || || ||||| | Sbjct 19024 ATT-GTGGCCTCGATGTCCAAGTATTGAAAAGTGTAGGAGAAGCATGGGTTAACCAACGT 18966 Query 63657 TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 63716 | || | || || ||| || | |||||||| || || || | |||||| ||||| Sbjct 18965 TGTGACATTAAATGGTAAGTTTTGATAGCTGAATCAATGTCATTCTTATGAATCCCTACA 18906 Query 63717 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG 63776 | || | ||||||||| |||||||| || |||| | | | || |||| | ||| Sbjct 18905 ACAACCCTCATTAACATATGCTGAGGCCTCTCAA-TAACAACTCCATTGTTTTTTAAAAG 18847 Query 63777 -TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 63810 || ||| | |||| || ||||||||||| |||| Sbjct 18846 ATACGATCTCTCCAGTGTCTTAAAACCAAAGTAGT 18812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 ||| || ||||| | |||| ||| || | ||| | || ||||||||||| | |||||| Sbjct 2818 TCCACCTTGATCAACATATCGAGCAGTATCATTGAATACCCTCAACATTGGCACAATACC 2759 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 || ||| | ||||| || || |||||| || | | |||||||| ||| | ||| Sbjct 2758 ATTCGATGTGCCATTTGTTCCTCGGATATAACTACTGGTTGCACGAATGTTATGCACTGA 2699 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 | ||| | ||| || || ||| |||| || || |||| || ||||| || Sbjct 2698 AACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCCAATTCCTTTAGAGTATCATATAT 2639 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593 || || ||||||||||| ||||| || || || |||||| Sbjct 2638 CCCTTCAATGCTATCATCTTTCATGCAAACAAGGAAGCAGCTA 2596 >seq59164 Length=25038 Score = 159 bits (176), Expect = 4e-34 Identities = 447/674 (66%), Gaps = 9/674 (1%) Strand=Plus/Plus Query 63141 AACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCA 63199 || || || |||||| || | |||| |||||| |||||| ||||| | ||| ||||| Sbjct 3500 AAATCTTCACCCCAA-CAGTTAGCAATACCAGGAGATTCATTGGGACAAAACAATGACCA 3558 Query 63200 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63259 | |||| || | |||||||||||| || || | |||||| || | |||||| Sbjct 3559 TGTAGAATTCTCCTAGACCCTTTTCATAAAGAGTTCTGGCACCCAAAGCGCAAAAAATAG 3618 Query 63260 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63319 ||| | | || | ||| || || || ||||| | | || || ||| | | || Sbjct 3619 ATCACATGCCCTGTTTTCTTCCTTCCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA- 3677 Query 63320 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63379 || | |||||| || || ||||| |||| | | || || ||| ||| || || Sbjct 3678 ATATGCATGCCATGGATCTAAGTACATGGAAAAGGCACCCTTCCTCTTGCCTCCACCTTG 3737 Query 63380 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63439 ||| | |||| ||| || | ||| | || ||||||||||| | ||||| || ||| | Sbjct 3738 ATCAACATATCAAGCAGTATCATTGAATACCCTCAACATTGGCACGATACCATTGGATGT 3797 Query 63440 ACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63499 ||||| || || | |||| | | | | |||| ||| ||| | ||| | ||| | Sbjct 3798 GCCATTTGTTCCTCGGGTATAAATACTAGTTGCACAAATGTTATGCACTGAAACACCAAA 3857 Query 63500 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTAT 63559 ||| || || ||| |||| | ||| |||| | ||||| || ||||| || Sbjct 3858 TCCTCCAGCTGATTTTCTTATTACAACACATTCCTTTAGATTATCATATATCCCCTCAAT 3917 Query 63560 GCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT-TCCC- 63617 | ||||||| ||||| ||| || || || ||| || | ||| | | ||| |||| Sbjct 3918 GTTATCATCTTTCATGCAAAGAAGGAATCAACTACTCAAAT-GTGGCCTC-AGTGTCCCA 3975 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 | ||| || | ||||||||| || || ||||| || || | || || ||| || Sbjct 3976 GTATTGAAAATTTTAGGAGAAGTATGGGTGAACCAGCGTTGTGACATTAAATGGTAAGTT 4035 Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737 | |||| ||| || || || | |||||| ||||| | || | ||||||||| || Sbjct 4036 TTGATAGTTGAATCAATGTCATTCTTATGAATCCCTACAACAACCCTCATTAACATATGT 4095 Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTT 63796 ||||| || |||| | | | || |||| | ||| || ||| | ||||| || || Sbjct 4096 TGAGGCCTCTCAA-TAACAACTCCATTGTTTTTTAAAAGATACGATCTCTCCAATGTCTT 4154 Query 63797 AAAACCAAAATAGT 63810 ||||||||| |||| Sbjct 4155 AAAACCAAAGTAGT 4168 >seq89744 Length=19024 Score = 150 bits (166), Expect = 2e-31 Identities = 445/674 (66%), Gaps = 9/674 (1%) Strand=Plus/Minus Query 63141 AACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCA 63199 || || || |||||| || | |||| |||||| |||||| ||||| | ||| ||||| Sbjct 15510 AAATCTTCACCCCAA-CAGTTAGCAATACCAGGAGATTCATTGGGACAAAACAATGACCA 15452 Query 63200 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63259 | |||| || | |||||||||||| | || | |||||| || | ||| || Sbjct 15451 TGTAGAATTCTCCTGGACCCTTTTCATAAAGAGTTTTGGCACCCAAAGCGCAAAAAACAG 15392 Query 63260 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63319 ||| | | || | ||| || || || ||||| | | || || ||| | | || Sbjct 15391 ATCACATGCCCTGTTTTCTTCCTTCCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA- 15333 Query 63320 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63379 ||| | |||||| || || ||||| ||||| | | || || || ||| || || Sbjct 15332 ATCTGCATGCCATGGATCTAAGTACATGGCAAAGGCACCCTTCCTCTTCCCTCCACCTTG 15273 Query 63380 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63439 ||| | |||| ||| || | ||| | || ||||||||||| | |||||| || ||| | Sbjct 15272 ATCAACATATCGAGCAGTATCATTGAATACCCTCAACATTGGCACAATACCATTGGATGT 15213 Query 63440 ACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63499 ||||| || || | |||| | | | | |||||||| ||| | ||| | ||| | Sbjct 15212 GCCATTTGTTCCTTGGGTATAAATACTAGTTGCACGAATGTTATGCACTGAAACACCAAG 15153 Query 63500 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTAT 63559 ||| || | ||| |||| | ||| |||| | ||||| || ||||| || Sbjct 15152 TCCTCCAACTGATTTTCTTATTACAACACATTCCTTTAGATTATCATATATCCCCTCAAT 15093 Query 63560 GCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT-TCC-C 63617 | |||||| | ||| || || || || ||| || || ||| | | ||| ||| Sbjct 15092 GTTATCATATTTTATGCAAACAAGGAATCAACTACTCAATT-GTGGCCTC-AGTGTCCTA 15035 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 | ||| |||| | ||||||| || || ||||| || || | || || ||| || Sbjct 15034 GTATTGAATAGTTTTGGAGAAGTATGGGTGAACCAGCGTTGTGACATTAAATGGTAAGTT 14975 Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737 | |||||||| || || || | |||||| ||||| | || | ||||||||| || Sbjct 14974 TTGATAGCTGAATCAATGTCATTCTTATGAATCCCTACAACAACTCTCATTAACATATGT 14915 Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTT 63796 ||||| || |||| | | | || |||| | ||| || ||| | ||||| || || Sbjct 14914 TGAGGCCTCTCAA-TAACAACTACATTGTTTTTTAAAAGATACGATCTCTCCAATGTCTT 14856 Query 63797 AAAACCAAAATAGT 63810 ||||||||| |||| Sbjct 14855 AAAACCAAAGTAGT 14842 >seq863644 Length=2505 Score = 113 bits (124), Expect = 5e-20 Identities = 295/444 (66%), Gaps = 7/444 (2%) Strand=Plus/Minus Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 ||| || | ||| | |||| ||| | | |||| | |||||||||||||| | |||||| Sbjct 1855 TCCACCTTAATCAAGATATCAAGCAATATCATTAAATACTCTCAACATTGGCACAATACC 1796 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| ||| | ||||| || || | |||| || ||| | |||||||| ||| | ||| Sbjct 1795 GTTGGATGTGCCATTTGTTCCTCGGGTATAACTACCAATTGCACGAATGTTATGCACTGA 1736 Query 63491 TAGACC--TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63548 | ||| | ||| || || ||| |||| | ||| |||| || ||||| Sbjct 1735 AACACCAAAAGTCCTCCAGCTGATTTTCTTATTACATCACATTCCTTTAGAGTCTCATAT 1676 Query 63549 ATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC-ATTTGGTGACG 63607 || ||||| ||||||||||| ||||| || || || || ||| | || ||| || Sbjct 1675 ATCCCCTCAATGCTATCATCTTTCATGCAAACAAGGAAGCAACTACTCAATGTGGCCTCG 1616 Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667 || || |||| || | ||||||||||| || || ||||| || | | || Sbjct 1615 --GTGTCCCAACATTGAAAAGTGTAGGAGAAGCATGGGTGAACCAGCGTTGTAACATTAA 1558 Query 63668 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63727 | ||| || | |||| | || || || | |||||| ||||| | || | ||| Sbjct 1557 GTGGTAAGTTTTGATAGTTTCATCAATGTCATTCTTATGAATCCCTACAACAACCCTCAT 1498 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG-TAGGATTTTT 63786 ||| || || ||||| || | || | | | | || |||| | ||| || || | | Sbjct 1497 TAAAATATGTTGAGGCCTCTGAA-TAACAACTCGATTGTTTTTTAAAAGATACAATCTCT 1439 Query 63787 CCAAAGTTTTAAAACCAAAATAGT 63810 |||| || ||||||||||| |||| Sbjct 1438 CCAATGTCTTAAAACCAAAGTAGT 1415 >seq176824 Length=11403 Score = 98.7 bits (108), Expect = 1e-15 Identities = 287/437 (66%), Gaps = 4/437 (1%) Strand=Plus/Plus Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 ||| || ||||| | |||| ||| | | ||| | || ||||||||||| | | || | Sbjct 9669 TCCACCTTGATCAAAATATCAAGCAATATCATTGAATACCCTCAACATTGGCACACTATC 9728 Query 63431 GTTTGATATACCATTGGTACCG-GAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63489 || ||| | ||||| || || ||| |||| || ||| | |||| ||| ||| |||| Sbjct 9729 ATTGGATGTGCCATTTGTTCCTCGAG-TATAACTACCAGTTGCACAAATGTTATGCATTG 9787 Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549 | | ||| | ||| || | ||| |||| | ||| |||| || ||||| | Sbjct 9788 AAACACCAAGTCCTCCATCTGATTTTCTTATTACAACACATTCCTTTAGAGTATCATATA 9847 Query 63550 TACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63609 | | ||| ||||||||||| ||||| || || || || || || ||| | | Sbjct 9848 TCCACTCAATGCTATCATCTTTCATGCAAACAAGGAAGAAGGTACTCAATTGTGGCCTTG 9907 Query 63610 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63669 ||| ||||| || | ||||||||||| || || ||| | || || | || || Sbjct 9908 GTGTTATAGCATTGAAAAGTGTAGGAGAAGCATGGGTTAACTAGAATTGTGACATTAAAT 9967 Query 63670 TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63729 ||| || | ||||| || || || || | |||||| ||||| | | | ||||| Sbjct 9968 GGTAAGTTTTGATAGCCGAATCAATTTCATTCTTATGAATCCCTACAACAAACCTCATTA 10027 Query 63730 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCC 63788 |||| | ||||| || |||| | | | || |||| | ||| || || | ||| Sbjct 10028 ACATATTTTGAGGCCTATCAA-TAACAACTCCATTGTTTTTTAAAAGATACAATCTCTCC 10086 Query 63789 AAAGTTTTAAAACCAAA 63805 || || ||||||||||| Sbjct 10087 AATGTCTTAAAACCAAA 10103 >seq177539 Length=11366 Score = 93.3 bits (102), Expect = 5e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 |||||| ||||||| || | ||| || | |||| | || | ||||||||| |||||||| Sbjct 6551 TCCTCCTTGATCTACATAGCGAGCAGTATCATTAAACACGCGCAACATTGGCATAATACC 6610 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 |||||| | ||||| || || || || || | | |||||||||| |||||| Sbjct 6611 ATTTGATGTGCCATTTGTTCCACGTATGTAACTATTTGTTGAACGAATATTATGAATTGA 6670 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 | || || || ||||| ||| || | || ||| ||| | || ||||| || Sbjct 6671 AACTCCAATGCCTCCTGCTGATTTGCTAATCACGGCACATTCTTTGAGGGTATCATAAAT 6730 Query 63551 ACCCTCTATGCTATCATCGATCAT 63574 ||| || ||||||||||| |||| Sbjct 6731 ACCTTCAATGCTATCATCCTTCAT 6754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543103317626200