Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq76002 125 2e-23 seq59164 109 1e-18 seq89744 96.9 8e-15 seq256579 91.5 3e-13 >seq76002 Length=21272 Score = 125 bits (138), Expect = 2e-23 Identities = 525/816 (64%), Gaps = 27/816 (3%) Strand=Plus/Plus Query 363350 ATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TATTTTCGGATATAAGACGATG 363408 |||| | |||| ||||| | |||| | || ||||| || ||| || | |||||| || Sbjct 18776 ATGAAGAAATCATCTATGATAGGGATTTTGATTATGACTACTTT-GGTTTTAAGACACTG 18834 Query 363409 GAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTA 363468 |||| ||| || || | | |||||| | | || |||| | || |||||||||||| Sbjct 18835 GAGAGATCGTATCTTTTAAAAAACAATGGAGTTGTTATTGAGAGGCCTCAGCATATGTTA 18894 Query 363469 ATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAG 363528 ||| | |||| | | || || ||| || ||||| | || || |||| || | Sbjct 18895 ATGAGGGTTGTTGTAGGGATTCATAAGAATGACATTGATTCAGCTATCAAAACTTACCA- 18953 Query 363529 CTTCTAAGTGCT--CGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAAC-T 363585 || | || ||| || || || || | || ||| | | |||| || | || | Sbjct 18954 -TTTAATGTCACAACGTTGGTTAACCCATGCTTCTCCTACACTTTTCAATACTTGGACAT 19012 Query 363586 CGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGT 363645 || | ||||| | | || ||||||| | ||||| | ||| ||||||||| Sbjct 19013 CG-AGGCCACAATTCAGTAGTTTCTTTCTTGTTTGCATGAAATATGATAGCATCGAGGGG 19071 Query 363646 ATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT----GCAGGCGGAATTGG 363701 || | ||| || || ||| | |||| | | || ||||| || || ||| |||| Sbjct 19072 ATATATGATACTCTAAAGGAATGTGTTGTAAT----AAGAAAATCAGCTGGAGGACTTGG 19127 Query 363702 TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTC 363761 ||| | | || || |||||||| ||||| | || || ||| || || Sbjct 19128 TGTTTAAGTGCATAACATTCGTGCAACTGGTAGTTATACCCGAGGAACAAATGGCACATC 19187 Query 363762 GAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGG 363821 ||||| | || || ||| | | || || | || | | | || || || || || Sbjct 19188 CAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATTTTTCTCGATATGTTGATCAAGG 19247 Query 363822 TGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTT 363881 |||||| ||| | || || || ||| | ||||| | ||| | ||||| ||| |||| Sbjct 19248 TGGAGGCAAGAGGAAGGGTGCCTTTTCCATGTACTTAGAGACATGGCATGCAGATGTTTT 19307 Query 363882 TGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTT 363941 ||||||||| ||| | |||| ||| || || || ||| | ||||||||||||| Sbjct 19308 TGAGTTTCTGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAACAGGACACGTGATCTGTT 19367 Query 363942 CTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTC 364001 | |||||||||||| | |||| |||||||| | || ||| | | ||||| Sbjct 19368 TTTTGCACTTTGGGTGCCAGACCTCTTTATGAAAAGGGTATAGGAGAATTCTACATGGTC 19427 Query 364002 ACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTG 364060 | | ||||| || | ||| ||| |||||| | || ||| |||| ||| || | ||| Sbjct 19428 ATTGTTTTGTCCCAATGAAGCTCCTGGTCTTGCTGAGTGT-TGGGCTGAAGA--TTTTTG 19484 Query 364061 -----CTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACA 364115 || || | |||| ||||| | |||| ||||| ||| | | | ||| Sbjct 19485 AAAAACTGTACATGAAA--TATGAGCCATAGGGTAAGGCAAAAAAGGTTGTACAGGAACA 19542 Query 364116 GAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 |||||| |||||| | | |||| || ||||| || Sbjct 19543 GAAGCTTTGGTTTTCTGTTCTGGAATCTCAGATAGA 19578 >seq59164 Length=25038 Score = 109 bits (120), Expect = 1e-18 Identities = 452/705 (64%), Gaps = 21/705 (3%) Strand=Plus/Minus Query 363358 ATCAATTATGAGAAGGATCTCGAGTATGA-TATTTTCGGATATAAGACGATGGAGAAATC 363416 |||| ||||| | |||| | || ||||| || ||| || | |||||| |||||| ||| Sbjct 4196 ATCATCTATGATAGGGATTTGGATTATGACTACTTT-GGTTTTAAGACATTGGAGAGATC 4138 Query 363417 CTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGT 363476 || || | | |||||| | | || |||| | || || |||||||||||| | || Sbjct 4137 GTATCTTTTAAAAAACAATGGAGTTGTTATTGAGAGGCCTCAACATATGTTAATGAGGGT 4078 Query 363477 TGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT----TC 363532 || | | || || ||| || ||||| | | || |||| || | | || Sbjct 4077 TGTTGTAGGGATTCATAAGAATGACATTGATTCAACTATCAAAACTTACCATTTAATGTC 4018 Query 363533 TAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC 363592 | ||| || |||| || | | || | ||| | |||| |||| || | | | Sbjct 4017 ACAACGCTGGT----TCACCCATACTTCTCCTAAAATTTTCAATACTGGGACACTGAGGC 3962 Query 363593 CACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTG 363652 |||| || | ||| || ||||| ||||| || ||| ||| ||||| || | || Sbjct 3961 CACATTTGAGTAGTTGATTCCTTCTTTGCATGAAAGATGATAACATTGAGGGGATATATG 3902 Query 363653 ACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT----GCAGGCGGAATTGGTGTATCG 363708 | | || ||| | |||| | | || ||||| || || ||| ||||||| || Sbjct 3901 ATAATCTAAAGGAATGTGTTGTAAT----AAGAAAATCAGCTGGAGGATTTGGTGTTTCA 3846 Query 363709 ATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGG 363768 | || || || ||||| | | ||| | || || ||| || || ||||| Sbjct 3845 GTGCATAACATTTGTGCAACTAGTATTTATACCCGAGGAACAAATGGCACATCCAATGGT 3786 Query 363769 CTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGA 363828 | || || ||| | | || || | ||||||| | || || || || |||||||| Sbjct 3785 ATCGTGCCAATGTTGAGGGTATTCAATGATACTGCTTGATATGTTGATCAAGGTGGAGGC 3726 Query 363829 AAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888 ||| | || || || ||| | ||||| | || || ||||| || ||||||||||| Sbjct 3725 AAGAGGAAGGGTGCCTTTTCCATGTACTTAGATCCATGGCATGCATAT-TTTTTGAGTTT 3667 Query 363889 CTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948 || ||| | |||| ||| || || || ||| | ||| ||||||| || | ||| Sbjct 3666 CTGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAACAGGGCATGTGATCTATTTTTTGCG 3607 Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008 |||||||| | || | |||||||| | || ||| | | |||||| | ||| Sbjct 3606 CTTTGGGTGCCAGAACTCTTTATGAAAAGGGTCTAGGAGAATTCTACATGGTCATTGTTT 3547 Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGA 364052 || || | |||| ||| ||| || | | ||| |||||||| || Sbjct 3546 TGTCCCAATGAATCTCCTGGTATTGCTAACTGT-TGGGGTGAAGA 3503 >seq89744 Length=19024 Score = 96.9 bits (106), Expect = 8e-15 Identities = 450/705 (64%), Gaps = 21/705 (3%) Strand=Plus/Plus Query 363358 ATCAATTATGAGAAGGATCTCGAGTATGA-TATTTTCGGATATAAGACGATGGAGAAATC 363416 |||| ||||| | |||| | || ||||| || ||| || | |||||| |||||| ||| Sbjct 14814 ATCATCTATGATAGGGATTTGGATTATGACTACTTT-GGTTTTAAGACATTGGAGAGATC 14872 Query 363417 CTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGT 363476 || || | | ||||| | | || |||| | || || |||||||||||| | || Sbjct 14873 GTATCTTTTAAAAAACAATGTAGTTGTTATTGAGAGGCCTCAACATATGTTAATGAGAGT 14932 Query 363477 TGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT----TC 363532 || | | || || ||| || ||||| | || || |||| || | | || Sbjct 14933 TGTTGTAGGGATTCATAAGAATGACATTGATTCAGCTATCAAAACTTACCATTTAATGTC 14992 Query 363533 TAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC 363592 | ||| || |||| || | | |||| | | | |||| || | || | | | Sbjct 14993 ACAACGCTGGT----TCACCCATACTTCTCCAAAACTATTCAATACTAGGACACTGAGGC 15048 Query 363593 CACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTG 363652 |||| || | ||| || ||| | || || | ||| ||| ||||| || | || Sbjct 15049 CACAATTGAGTAGTTGATTCCTTGTTTGCATAAAATATGATAACATTGAGGGGATATATG 15108 Query 363653 ACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG-CAG---GCGGAATTGGTGTATCG 363708 | | || ||| | |||| | | || ||||| ||| | ||| ||||||| || Sbjct 15109 ATAATCTAAAGGAATGTGTTGTAAT----AAGAAAATCAGTTGGAGGACTTGGTGTTTCA 15164 Query 363709 ATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGG 363768 | || || |||||||| | | ||| | | || ||| || || ||||| Sbjct 15165 GTGCATAACATTCGTGCAACTAGTATTTATACCCAAGGAACAAATGGCACATCCAATGGT 15224 Query 363769 CTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGA 363828 | || || ||| | | || || | ||||||| | || || || || |||||||| Sbjct 15225 ATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCGATATGTTGATCAAGGTGGAGGG 15284 Query 363829 AAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888 ||| | || || || ||||| ||||| | || || ||||| ||| ||||||||||| Sbjct 15285 AAGAGGAAGGGTGCCTTTGCCATGTACTTAGATCCATGGCATGCAGAT-TTTTTGAGTTT 15343 Query 363889 CTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948 || ||| | |||| ||| || || || ||| | ||| |||||||||| | ||| Sbjct 15344 CTGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAACAGGGCATGTGATCTGTTTTTTGCG 15403 Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008 |||||||| | | | |||||||| | || ||| | | |||||| | ||| Sbjct 15404 CTTTGGGTGCCAAAACTCTTTATGAAAAGGGTCCAGGAGAATTCTACATGGTCATTGTTT 15463 Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGA 364052 || || | |||| ||| ||| || | | ||| |||||||| || Sbjct 15464 TGTCCCAATGAATCTCCTGGTATTGCTAACTGT-TGGGGTGAAGA 15507 >seq256579 Length=8500 Score = 91.5 bits (100), Expect = 3e-13 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 22521 CATTTTCTTTTCTGG-AGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGC 22579 |||| | |||| | | ||| |||||||| || |||||| | || ||||| | | |||| Sbjct 732 CATTCTTTTTTATTGCAGC-TTTTGTGCCATATTTTGGTTGAAGAAACGGGGCTTAATGC 790 Query 22580 CGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTG 22639 | ||| |||| ||||| |||||| | ||| ||||||||||||||||| ||||||| Sbjct 791 CAGGTTTAACTTTTTCTAATGAGCTTATTTCAAGAGATGAGGGTCTTCATTGTGATTTTG 850 Query 22640 CGTGTATGCTATATCGGAATCATATCATT 22668 | ||| | || ||| || || || | ||| Sbjct 851 CTTGTCTCCTTTATAGGTATGATGTTATT 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1132124911889490